Factsheet for TraesCS3D01G273400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.75	97.97
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	96.85	97.07
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	94.16	89.53
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	76.4	76.4
Zm00001d043443_P001	Maize	plasma membrane	75.28	73.95
EES03598	Sorghum	endoplasmic reticulum, vacuole	75.06	72.45
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	41.8	64.36
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.4	64.03
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	61.8	63.07
Bra036493.1-P	Field mustard	vacuole	56.4	59.34
CDY31945	Canola	vacuole	56.4	59.34
AT2G20680.1	Thale cress	plasma membrane, vacuole	57.3	58.89
AT4G28320.1	Thale cress	vacuole	56.63	58.47
CDY05783	Canola	extracellular, plasma membrane, vacuole	56.4	58.24
CDY13860	Canola	golgi, vacuole	56.18	57.87
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	56.18	57.87
Bra031137.1-P	Field mustard	golgi, vacuole	56.18	57.87
CDX81978	Canola	golgi, vacuole	55.96	57.64
Bra026266.1-P	Field mustard	vacuole	55.73	57.54
CDX89187	Canola	vacuole	55.73	57.54
CDY18983	Canola	vacuole	55.51	57.31
Solyc07g053920.2.1	Tomato	vacuole	56.63	57.14
PGSC0003DMT400047236	Potato	vacuole	56.4	56.92
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	56.63	56.76
KRH26952	Soybean	extracellular, plasma membrane, vacuole	53.93	56.07
KRH22381	Soybean	vacuole	53.93	56.07
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	55.73	55.86
KRH25580	Soybean	mitochondrion	54.16	55.28
KRH55954	Soybean	mitochondrion, vacuole	53.93	55.05
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	55.28	54.91
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	57.53	53.11
TraesCS5D01G145900.1	Wheat	cytosol	42.47	48.96
TraesCS7D01G225500.1	Wheat	vacuole	45.39	47.09
TraesCS3D01G241300.1	Wheat	extracellular	39.33	41.18
TraesCS6D01G312600.1	Wheat	vacuole	36.85	39.71
TraesCS6D01G312500.1	Wheat	golgi, vacuole	37.3	39.52
TraesCS6D01G311900.1	Wheat	vacuole	37.3	38.97
TraesCS5D01G504800.1	Wheat	vacuole	36.18	33.89

Protein Annotations

EnsemblPlants:TraesCS3D01G273400.1	EnsemblPlantsGene:TraesCS3D01G273400	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	ScanProsite:PS00659	SEG:seg
SUPFAM:SSF51445	TMHMM:TMhelix	MapMan:21.2.3.2.2	:	:	:

Description

No Description!

Coordinates

chr3D:+:379228161..379229870

Molecular Weight (calculated)

49931.2 Da

IEP (calculated)

6.084

GRAVY (calculated)

-0.179

Length

445 amino acids

Sequence
(BLAST)

001: MAACNGLFVY HILGLASLVA VFYFSLLGEV DLRFPGLLPS SGASQHSHDA SLPFVERRGA QLFLEGRPFY INGWNSYWLM DQAVEPASRH RVSDMFRAAT
101: GMGLTVCRTW AFNDGAYNAL QLSPGHFDER VFRALDLVVV EARRHGVRLV LSLANNLEAY GGKTQYVRWA WDEGVGLTAS NDSFFFDPAI RDYFKVYLKA
201: LLTRTNHLTG VQYKDDPTIL AWELMNEPRC ISDPSGNTLQ RWIEEMAGYV KSIDRRHLLT VGTEGFYGPT SPPEKLSVNP GHWFNNYGLD FIRNSKISDI
301: DFASVHLYPD TWLLHADLEE KLKFVTQWVS SHFEDGDTEL GGKPVVLTEF GLSHLVKGFE QSQRDAFYKS VYDIVHASAK RGGAGAGAIV WQLAAEDMEE
401: YHDGFAIVPS ETPSMQKLLT EQSCRLAALR HGEEEAKRIL KAVCG

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.