Factsheet for Bra026266.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89187	Canola	vacuole	100.0	100.0
AT4G28320.1	Thale cress	vacuole	87.01	87.01
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	56.38	84.08
Bra036493.1-P	Field mustard	vacuole	79.12	80.61
Bra031137.1-P	Field mustard	golgi, vacuole	80.28	80.09
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	68.21	68.06
KRH22381	Soybean	vacuole	65.66	66.12
KRH26952	Soybean	extracellular, plasma membrane, vacuole	65.2	65.65
KRH55954	Soybean	mitochondrion, vacuole	65.66	64.91
PGSC0003DMT400047236	Potato	vacuole	66.13	64.63
Solyc07g053920.2.1	Tomato	vacuole	66.13	64.63
KRH25580	Soybean	mitochondrion	65.2	64.45
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	65.2	63.29
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	57.31	63.01
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	64.73	62.84
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	62.41	61.7
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	58.24	56.03
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.54	55.73
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.31	55.63
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.31	55.63
Zm00001d043443_P001	Maize	plasma membrane	57.77	54.97
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	56.38	54.61
EES03598	Sorghum	endoplasmic reticulum, vacuole	57.54	53.8
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	59.63	53.32
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	56.84	52.35
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.75	40.24
Bra033312.1-P	Field mustard	golgi, vacuole	37.59	39.42
Bra001383.1-P	Field mustard	extracellular	36.43	37.83
Bra005662.1-P	Field mustard	nucleus	42.0	28.55

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra026266	EnsemblPlants:Bra026266.1	EnsemblPlants:Bra026266.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009791	GO:GO:0009845	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	UniProt:M4EBV7	PFAM:PF00150	PANTHER:PTHR31451
PANTHER:PTHR31451:SF1	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0002544125	SEG:seg	:

Description

AT4G28320 (E=2e-223) | glycosyl hydrolase family 5 protein / cellulase family protein

Coordinates

chrA01:-:10297537..10299195

Molecular Weight (calculated)

49995.5 Da

IEP (calculated)

7.655

GRAVY (calculated)

-0.417

Length

431 amino acids

Sequence
(BLAST)

001: MVPARNGSAI PVLGFLICAA FIYLSFRDLW LNHKWRTEIG FVKRNGTQFV VDGKALYVNG WNSYWFMDHA VNEHSRYLVS EMLETGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFK ALDHVIAEAK KHDVRLLLCL VNNLQAYGGK SQYVQWAWQE GVGLSSSNDS FFFDPSIRKY FKNYLTALLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTSD VSGDTLQDWI DEMTSFIKSI DDKHLLTVGL EGFYGPNSPK RLTVNPEMWP SELGTDFVRN SNSSNIDFAS VHIYPDHWFH
301: NQTFEDKLKF VVQWMQSHIE DGMKELKKPV LFTEFGLSNL NKDYEPSQRE RFYRTIFDVV YKSAKRRKAG AGTLVWQLFM EGMEGFNDEF GIVPHEQDPM
401: YRLMVEQSCR LGKVTGRREE HKLRKLCSHK H

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.