Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036494.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 68.32 | 100.0 |
| CDY31945 | Canola | vacuole | 100.0 | 100.0 |
| Bra031137.1-P | Field mustard | golgi, vacuole | 91.73 | 89.81 |
| AT2G20680.1 | Thale cress | plasma membrane, vacuole | 90.78 | 88.68 |
| Bra026266.1-P | Field mustard | vacuole | 80.61 | 79.12 |
| VIT_12s0028g03610.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 69.98 | 68.52 |
| KRH22381 | Soybean | vacuole | 68.09 | 67.29 |
| KRH26952 | Soybean | extracellular, plasma membrane, vacuole | 67.85 | 67.06 |
| Solyc07g053920.2.1 | Tomato | vacuole | 69.27 | 66.44 |
| PGSC0003DMT400047236 | Potato | vacuole | 69.27 | 66.44 |
| KRH55954 | Soybean | mitochondrion, vacuole | 68.09 | 66.06 |
| KRH25580 | Soybean | mitochondrion | 68.09 | 66.06 |
| Solyc10g008300.2.1 | Tomato | golgi, mitochondrion, vacuole | 68.79 | 65.54 |
| PGSC0003DMT400034196 | Potato | golgi, mitochondrion, plastid, vacuole | 68.56 | 65.32 |
| GSMUA_Achr5P09360_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 60.05 | 64.8 |
| GSMUA_Achr1P04970_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 64.07 | 62.16 |
| TraesCS3A01G274200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 60.52 | 57.66 |
| GSMUA_Achr8P20030_001 | Banana | golgi, plastid, vacuole | 60.76 | 57.37 |
| TraesCS3B01G307900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 59.81 | 56.98 |
| TraesCS3D01G273400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 59.34 | 56.4 |
| Zm00001d043443_P001 | Maize | plasma membrane | 59.1 | 55.19 |
| Os01t0746700-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 57.92 | 55.06 |
| EES03598 | Sorghum | endoplasmic reticulum, vacuole | 59.34 | 54.45 |
| HORVU3Hr1G071210.3 | Barley | extracellular, plasma membrane, vacuole | 59.57 | 53.85 |
| GSMUA_Achr10P... | Banana | nucleus, plasma membrane, plastid, vacuole | 61.23 | 53.73 |
| Bra033312.1-P | Field mustard | golgi, vacuole | 39.01 | 40.15 |
| Bra034151.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 39.01 | 39.76 |
| Bra001383.1-P | Field mustard | extracellular | 37.12 | 37.83 |
| Bra005662.1-P | Field mustard | nucleus | 42.55 | 28.39 |
Protein Annotations
| EnsemblPlants:Bra036493.1 | EnsemblPlants:Bra036493.1-P | EnsemblPlantsGene:Bra036493 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF1 | PFAM:PF00150 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF51445 | UniParc:UPI0002540E56 | UniProt:M4F5Y4 | MapMan:21.2.3.2.2 | : |
Description
AT2G20680 (E=8e-227) | glycosyl hydrolase family 5 protein / cellulase family protein
Coordinates
chrA07:-:74718..76363
Molecular Weight (calculated)
48580.8 Da
IEP (calculated)
8.439
GRAVY (calculated)
-0.392
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPVIPILGF LTCAAFMYLS LGFRGGEPEV GFVSRNGTQF VLDGKPLYVN GWNSYWFMDH AVNDHSRHRV GAMLQAGSKM GLTVCRTWAF NDGGYNALQI
101: SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSITGIE YRNDPTIFAW
201: ELINEPRCFT DISGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPKSP KRLTVNPERW ASELGSDFVR NSESPNIDFA SVHIYPDHWF HDQGFEDKVK
301: FVVKWMLSHI EDGDQELKKP VLFTEFGLSN LNKDYEPSQR DRFYRTIFDL VYKSAKRKRS GAGTLVWQFL IQGMEGFNDD FGIVPWEKKS IQRLMTEQSC
401: RLARVTGRHL QDKKSREICS HRP
101: SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSITGIE YRNDPTIFAW
201: ELINEPRCFT DISGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPKSP KRLTVNPERW ASELGSDFVR NSESPNIDFA SVHIYPDHWF HDQGFEDKVK
301: FVVKWMLSHI EDGDQELKKP VLFTEFGLSN LNKDYEPSQR DRFYRTIFDL VYKSAKRKRS GAGTLVWQFL IQGMEGFNDD FGIVPWEKKS IQRLMTEQSC
401: RLARVTGRHL QDKKSREICS HRP
001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
Arabidopsis Description
MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.