Factsheet for AT2G20680.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	61.2	91.7
CDY31945	Canola	vacuole	88.68	90.78
Bra036493.1-P	Field mustard	vacuole	88.68	90.78
CDY05783	Canola	extracellular, plasma membrane, vacuole	90.3	90.72
CDY13860	Canola	golgi, vacuole	89.61	89.81
Bra031137.1-P	Field mustard	golgi, vacuole	89.61	89.81
CDX81978	Canola	golgi, vacuole	88.68	88.89
AT4G28320.1	Thale cress	vacuole	81.99	82.37
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	70.44	70.6
KRH22381	Soybean	vacuole	68.82	69.63
KRH26952	Soybean	extracellular, plasma membrane, vacuole	68.36	69.16
Solyc07g053920.2.1	Tomato	vacuole	69.75	68.48
PGSC0003DMT400047236	Potato	vacuole	69.52	68.25
KRH25580	Soybean	mitochondrion	68.13	67.66
KRH55954	Soybean	mitochondrion, vacuole	68.13	67.66
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	61.2	67.6
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	68.82	67.12
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	68.82	67.12
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	65.36	64.91
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	61.43	59.38
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	59.12	57.66
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.89	57.43
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.89	57.3
Zm00001d043443_P001	Maize	plasma membrane	59.35	56.73
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	62.36	56.02
EES03598	Sorghum	endoplasmic reticulum, vacuole	59.58	55.97
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	57.51	55.96
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	58.66	54.27
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	37.88	40.2
AT5G66460.1	Thale cress	vacuole	39.49	39.68
AT5G01930.1	Thale cress	endoplasmic reticulum	40.88	39.51
AT3G10890.1	Thale cress	extracellular	37.64	39.37
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	29.56	38.91
AT1G02310.2	Thale cress	golgi, vacuole	38.34	38.52

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EntrezGene:816596	ProteinID:AAD20927.1	ProteinID:AEC07056.1	EMBL:AK228569
ArrayExpress:AT2G20680	EnsemblPlantsGene:AT2G20680	RefSeq:AT2G20680	TAIR:AT2G20680	RefSeq:AT2G20680-TAIR-G	EnsemblPlants:AT2G20680.1
TAIR:AT2G20680.1	Unigene:At.39660	EMBL:BT008596	EMBL:BT025988	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0010412	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	Symbol:MAN2
RefSeq:NP_179660.2	PFAM:PF00150	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000200
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PO:PO:0025297	PANTHER:PTHR31451
PANTHER:PTHR31451:SF1	UniProt:Q7Y223	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0000196BD7	SEG:seg

Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]

Coordinates

chr2:+:8920447..8923227

Molecular Weight (calculated)

49560.9 Da

IEP (calculated)

6.955

GRAVY (calculated)

-0.314

Length

433 amino acids

Sequence
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.