Factsheet for Solyc10g008300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, vacuole

Predictor Summary:

plastid 1
extracellular 3
mitochondrion 3
vacuole 3
cytosol 1
endoplasmic reticulum 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	97.75	97.75
Solyc07g053920.2.1	Tomato	vacuole	81.98	82.54
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	46.85	71.97
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	69.82	71.76
CDY05783	Canola	extracellular, plasma membrane, vacuole	66.89	68.91
AT2G20680.1	Thale cress	plasma membrane, vacuole	67.12	68.82
Bra036493.1-P	Field mustard	vacuole	65.54	68.79
CDY31945	Canola	vacuole	65.54	68.79
Bra031137.1-P	Field mustard	golgi, vacuole	66.44	68.29
CDY13860	Canola	golgi, vacuole	66.44	68.29
CDX81978	Canola	golgi, vacuole	65.77	67.59
KRH22381	Soybean	vacuole	64.41	66.82
AT4G28320.1	Thale cress	vacuole	64.86	66.82
KRH26952	Soybean	extracellular, plasma membrane, vacuole	64.19	66.59
KRH25580	Soybean	mitochondrion	65.32	66.51
KRH55954	Soybean	mitochondrion, vacuole	65.09	66.28
Bra026266.1-P	Field mustard	vacuole	62.84	64.73
CDY18983	Canola	vacuole	62.84	64.73
CDX89187	Canola	vacuole	62.84	64.73
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	59.68	60.78
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	53.38	60.46
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	57.66	57.14
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	56.31	56.31
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	56.08	56.08
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.86	55.73
Zm00001d043443_P001	Maize	plasma membrane	56.31	55.19
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	54.95	54.83
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	56.98	54.06
EES03598	Sorghum	endoplasmic reticulum, vacuole	56.08	54.01
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	57.88	53.32
Solyc11g012190.1.1	Tomato	golgi, vacuole	46.85	45.51
Solyc12g013770.1.1	Tomato	vacuole	31.08	43.67
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	38.96	43.14
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	39.86	42.86
Solyc01g008710.2.1	Tomato	extracellular	38.06	42.36
Solyc06g064520.2.1	Tomato	vacuole	39.41	42.27
Solyc02g084990.2.1	Tomato	nucleus	40.99	41.94
Solyc10g074920.1.1	Tomato	extracellular	40.99	40.53
Solyc12g013670.1.1	Tomato	cytosol	15.77	39.55
Solyc12g013750.1.1	Tomato	cytosol	8.11	34.62
Solyc12g013760.1.1	Tomato	cytosol	4.28	27.54

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:K4CY07	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445
EnsemblPlantsGene:Solyc10g008300.2	EnsemblPlants:Solyc10g008300.2.1	TMHMM:TMhelix	UniParc:UPI000276B7B1	:	:

Description

No Description!

Coordinates

chr10:-:2446485..2451132

Molecular Weight (calculated)

51741.5 Da

IEP (calculated)

7.391

GRAVY (calculated)

-0.395

Length

444 amino acids

Sequence
(BLAST)

001: MVQSPMSRKL VRNGGLFYPV IGFALFVTFL YLAFGNLWGF NFNREEIKLS FVERNGTQFF VDGKAFYING WNSYWLMDHA VDYSNRPRIK GILQAGAKMG
101: LSVCRTWAFN DGGYNALQIS PGRFDERVFR ALDHVIAEAR KNGIRLMLSL VNNLHAFGGK TEYVKWAEKE GVALSSSNDS FFYDPTIRRY FKNYVKTVLT
201: RRNIYTGIEY RDDPTIFAWE LINEPRCMTD PSGDTLQDWI EEMSTFVKSI DRKHLLTVGL EGFYGRKSPK RSTGNPEFWA ADLGSDFIRN SMLSTIDFAS
301: VHVYPDHWFH DKNFEEKLKF AAKWMLSHIE DGDKELRKPI MFTEFGLSNE NEDFEPAQRD RFYKMVLDFI YKSAKRNRSG AGSFFWQFLV EGMELYNDDF
401: GIVPWERPST YELITEHSCR LAKEHGLLHT QMEHLKDFCA STRL

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.