Factsheet for Solyc06g064520.2.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083217	Potato	cytosol	43.96	98.38
Solyc12g013770.1.1	Tomato	vacuole	57.97	75.95
Solyc12g013670.1.1	Tomato	cytosol	31.4	73.45
Solyc12g013750.1.1	Tomato	cytosol	17.87	71.15
VIT_18s0089g00200.t01	Wine grape	vacuole	65.7	65.7
Solyc12g013760.1.1	Tomato	cytosol	10.87	65.22
KRH39855	Soybean	vacuole	61.84	62.9
KRH23949	Soybean	vacuole	61.59	62.65
GSMUA_Achr9P08250_001	Banana	vacuole	63.04	58.0
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	35.02	57.77
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	55.31	55.72
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	27.78	52.27
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	49.76	51.37
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	50.24	50.36
Solyc02g084990.2.1	Tomato	nucleus	52.42	50.0
Solyc01g008710.2.1	Tomato	extracellular	47.83	49.62
Solyc10g074920.1.1	Tomato	extracellular	48.55	44.77
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	42.27	39.41
Solyc07g053920.2.1	Tomato	vacuole	40.58	38.1
Solyc11g012190.1.1	Tomato	golgi, vacuole	41.79	37.86

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	ProteinID:AAM26920.1	EMBL:AF184238	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150	PFscan:PS51257	PANTHER:PTHR31451	PANTHER:PTHR31451:SF15
UniProt:Q6YM50	UniProt:Q9FZ03	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g064520.2	EnsemblPlants:Solyc06g064520.2.1
TMHMM:TMhelix	UniParc:UPI0000225909	SEG:seg	:	:	:

Description

MAN2Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6YM50]

Coordinates

chr6:+:40183847..40186664

Molecular Weight (calculated)

46837.4 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.277

Length

414 amino acids

Sequence
(BLAST)

001: MAYFQRLISC IFVLFLLSLA FACEARVLLD ENNANDQGFV RVNGAHFELN GSPFLFNGFN SYWLMHVAAE PSERYKVSEV LREASSAGLS VCRTWAFSDG
101: GDRALQISPG VYDERVFQGL DFVISEAKKY GIRLILSFVN NYNDFGGKAQ YVQWARNAGA QINGDDDFYT NYITKNYYKN HIKKVVTRFN TITGMTYKDD
201: STIMAWELMN EPRNQADYSG NTLNAWVQEM ASFVKSLDNK HLLEIGMEGF YGDSVPERKS INPGYQVGTD FISNHLIKEI DFATIHAYTD QWLSGQSDDA
301: QMIFMQKWMT SHWQDAKNIL KKPLVLAEFG KSSRDPGYNQ NIRDTFMSTI YRNIYSLAKD GGTMGGSLIW QLVAQGMENY EDGYCIELGK NPSTAGIITS
401: QSHAMTALAH LVKI

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.