Factsheet for PGSC0003DMT400034545

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039828	Potato	cytosol	13.66	44.44
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	82.44	42.78
PGSC0003DMT400083217	Potato	cytosol	33.66	37.3
Solyc11g012190.1.1	Tomato	golgi, vacuole	82.93	37.2
GSMUA_Achr5P22340_001	Banana	cytosol	53.17	27.66
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	56.1	25.5
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	55.61	25.39
GSMUA_Achr8P24410_001	Banana	mitochondrion	41.95	24.5
TraesCS7A01G223800.1	Wheat	cytosol	47.32	24.43
HORVU7Hr1G045910.1	Barley	vacuole	48.29	22.65
TraesCS7D01G225500.1	Wheat	vacuole	47.32	22.61
PGSC0003DMT400095096	Potato	cytosol	33.17	22.08
TraesCS7B01G190600.1	Wheat	vacuole	46.83	21.97
Os06t0311600-01	Rice	golgi, vacuole	46.83	21.82
PGSC0003DMT400039735	Potato	cytosol	33.17	21.73
Zm00001d045873_P002	Maize	vacuole	44.88	21.15
OQU76322	Sorghum	golgi, vacuole	43.9	20.55
PGSC0003DMT400092800	Potato	peroxisome	20.0	20.2
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	39.51	18.24
PGSC0003DMT400047236	Potato	vacuole	39.02	18.14
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	37.56	17.78
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	31.71	17.15
PGSC0003DMT400090248	Potato	cytosol	21.46	16.12
PGSC0003DMT400080203	Potato	endoplasmic reticulum	32.2	14.7
PGSC0003DMT400039596	Potato	vacuole	20.98	12.87
PGSC0003DMT400039582	Potato	vacuole	3.41	3.21
PGSC0003DMT400092618	Potato	extracellular	0.0	0.0
PGSC0003DMT400093759	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400034545	EnsemblPlantsGene:PGSC0003DMG400013279	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1
PGSC:PGSC0003DMG400013279	SUPFAM:SSF51445	UniParc:UPI00029555FB	UniProt:M1B0V9	MapMan:35.1	:

Description

Hydrolase, hydrolyzing O-glycosyl compounds [Source:PGSC_GENE;Acc:PGSC0003DMG400013279]

Coordinates

chr11:-:563189..563917

Molecular Weight (calculated)

22939.6 Da

IEP (calculated)

7.754

GRAVY (calculated)

-0.163

Length

205 amino acids

Sequence
(BLAST)

001: MAEFVKSLDQ KHLVTIGLEG FYGVEKAGNV GLNPGKWAAS LGVDFIENSD IENFDFTSIH IPPQLVSQAE IKGGINSDAR VDFLSHWVDS HISEAEKILK
101: KPVLFTKVGF PSSIQKNGLY VRNIFLKIVY DKIYELAKKR KGGAGALVWQ LLVEGMEQYG DQFSFIAWKH PSTYKLMVEQ SCRLLNISSQ GLTHKKTQSE
201: ESLFG

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.