Factsheet for TraesCS5A01G146400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, vacuole

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G145900.1	Wheat	cytosol	90.48	98.45
HORVU5Hr1G046370.1	Barley	mitochondrion	96.9	96.9
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	96.67	96.67
HORVU4Hr1G058920.3	Barley	cytosol	36.9	92.26
HORVU3Hr1G057870.3	Barley	cytosol	35.48	91.98
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	30.0	81.82
Os12t0117300-00	Rice	cytosol	74.29	81.68
HORVU3Hr1G003960.2	Barley	cytosol	22.14	80.87
Os11t0118200-01	Rice	cytosol	38.81	80.69
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	24.52	79.84
HORVU6Hr1G036770.2	Barley	cytosol	21.19	71.2
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	72.38	71.19
Zm00001d005052_P002	Maize	plasma membrane	72.62	70.44
GSMUA_Achr7P22010_001	Banana	cytosol	63.33	64.25
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	52.86	54.41
HORVU6Hr1G009620.1	Barley	cytosol	19.52	52.23
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	54.29	50.89
Solyc10g074920.1.1	Tomato	extracellular	54.05	50.56
PGSC0003DMT400080203	Potato	endoplasmic reticulum	53.57	50.11
KRH64877	Soybean	endoplasmic reticulum	52.86	47.95
CDY11173	Canola	endoplasmic reticulum, vacuole	49.52	47.06
KRH00473	Soybean	nucleus	51.67	46.97
AT5G01930.1	Thale cress	endoplasmic reticulum	48.81	45.76
KRH40712	Soybean	nucleus	51.43	44.17
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	52.14	44.15
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.48	43.02
TraesCS3A01G241000.1	Wheat	golgi, vacuole	42.86	42.35
TraesCS6A01G333400.1	Wheat	golgi, vacuole	40.71	40.33
TraesCS6A01G333300.1	Wheat	golgi, vacuole	39.29	38.73
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	37.62	38.26
TraesCS4A01G368600.1	Wheat	endoplasmic reticulum, golgi, vacuole	38.1	33.97
Bra005662.1-P	Field mustard	nucleus	50.48	33.44
TraesCS7A01G223800.1	Wheat	cytosol	31.19	33.0
CDY61603	Canola	nucleus	42.14	25.11

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009845	GO:GO:0016787
InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150	ScanProsite:PS00659	PANTHER:PTHR31451
PANTHER:PTHR31451:SF9	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5A01G146400	EnsemblPlants:TraesCS5A01G146400.1	SEG:seg

Description

No Description!

Coordinates

chr5A:+:322676996..322679010

Molecular Weight (calculated)

46819.2 Da

IEP (calculated)

4.360

GRAVY (calculated)

-0.143

Length

420 amino acids

Sequence
(BLAST)

001: MGDMMCPAPA TARSTTTPRI PLLPYVLLGL ASTVMSLEPD AEEEWAAVER RGAHLVTRAA ERPFIIHGFN TYWLMSFAAD EATRPRVTAA IAEAAGAGLN
101: VCRTWAFADG GYHALQTAPF CYDEVVFQAL DFVVSEARRY KMRLILSLCN NWEDYGGKAQ YVRWGKEAGV DLTSDDDFFS GPTLKGYYKA FVEAVLSRIN
201: TITNEAYKDD PTILAWELIN EPRCPSDPSG DTLQAWIEEM ASYVKSIDTM HLVEIGIEGY YGPSTPELLL VNPDDYSGHV GTDFIRNHQA MGIDLASVHI
301: YSDTWLPDST EESHVQFVNT WMQQHIDDAA NLLGMPIVIG EFGLSLKDGK FENEFRETFM QTVYNNFLGS WESGMIGGGC LLWQLFPEGA EHMDDGYAVI
401: FAKSPSTFNL LANHSRKLEC

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.