Factsheet for TraesCS6B01G363900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G312600.1	Wheat	vacuole	94.67	94.67
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	93.95	93.95
TraesCS6B01G363800.1	Wheat	golgi, vacuole	72.16	74.13
TraesCS6B01G363700.1	Wheat	golgi, vacuole	74.33	71.9
KXG31170	Sorghum	golgi, vacuole	67.55	67.55
PGSC0003DMT400090248	Potato	cytosol	37.29	56.41
Zm00001d052158_P001	Maize	golgi, vacuole	60.29	56.21
GSMUA_Achr6P30560_001	Banana	vacuole	54.96	54.57
PGSC0003DMT400095096	Potato	cytosol	39.71	53.25
KRH68364	Soybean	vacuole	51.57	51.95
KRG96633	Soybean	nucleus	51.09	51.46
Solyc01g008710.2.1	Tomato	extracellular	49.39	51.13
TraesCS3B01G269200.1	Wheat	extracellular	51.57	50.12
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	48.43	49.88
KRG96685	Soybean	golgi, vacuole	47.7	47.02
KRH68408	Soybean	vacuole	46.49	46.27
KRH33420	Soybean	extracellular, golgi	37.53	45.59
Bra033312.1-P	Field mustard	golgi, vacuole	44.07	44.28
CDX89985	Canola	golgi, vacuole	44.07	44.28
CDY15229	Canola	golgi, vacuole	42.62	43.14
AT1G02310.2	Thale cress	golgi, vacuole	42.86	41.07
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	44.55	38.98
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	38.98	38.33
Os02t0766900-00	Rice	extracellular, golgi, vacuole	39.47	38.17
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.5	35.81
TraesCS7B01G190600.1	Wheat	vacuole	36.56	34.55

Protein Annotations

EnsemblPlants:TraesCS6B01G363900.1	EnsemblPlantsGene:TraesCS6B01G363900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF20	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
MapMan:21.2.3.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:634976776..634979422

Molecular Weight (calculated)

45646.3 Da

IEP (calculated)

9.229

GRAVY (calculated)

-0.248

Length

413 amino acids

Sequence
(BLAST)

001: MATSSPQLVM LVSCLAALAL AAGAGEADGR PKSRGFVTAR GSRFMAGGRP FYADGFNAYW LMYMASNPAD RSKALDVLDQ ASRLGATVVR TWAFSDGQGS
101: DRPLQITPGV YNEQVFVGLD FVIAEAKKRG IYLILSLVNN MDGFGGKKQY MQWARDRGHY LGSDDDFFSD ALTQQFYKNH IKRMITRVNT FTRVAYKDEP
201: TIFAWELMNE PRAPSDLSGK TMERWVASMS AYVKSVDPKH MVEIGMEGFY GESTPKRKRF NPGKGYTGGT DFVSNNRIPT VDFATIHIYP DQWLPGSSSQ
301: AQVEFTKRWM ASHIEDAGKA LRKALLVAEF GWSARSGGYT VAARDGYFRM VYDAIYASVK GGGACAGGLF WHVMAPGMES WTDGYDVVFE RSPTTAAVVS
401: QECAKIHRFT PAV

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.