Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043443_P001 | Maize | plasma membrane | 41.54 | 17.88 |
| Zm00001d043965_P001 | Maize | extracellular, vacuole | 29.23 | 13.38 |
| Zm00001d045873_P002 | Maize | vacuole | 26.15 | 11.72 |
| Zm00001d005052_P002 | Maize | plasma membrane | 25.64 | 11.55 |
| Zm00001d052158_P001 | Maize | golgi, vacuole | 25.64 | 11.29 |
| Zm00001d035149_P001 | Maize | vacuole | 28.21 | 11.02 |
| Zm00001d034723_P001 | Maize | vacuole | 24.62 | 10.0 |
Protein Annotations
| KEGG:00240+6.3.4.2 | Gene3D:3.20.20.80 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6LK14 | ProteinID:AQK80060.1 |
| InterPro:CTP_synthase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003883 | GO:GO:0006139 | GO:GO:0006221 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:P-loop_NTPase | PFAM:PF06418 |
| PANTHER:PTHR31451 | PANTHER:PTHR31451:SF1 | SUPFAM:SSF52540 | UniParc:UPI0008457A82 | EnsemblPlantsGene:Zm00001d035984 | EnsemblPlants:Zm00001d035984_P001 |
| EnsemblPlants:Zm00001d035984_T001 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:64659326..64670921
Molecular Weight (calculated)
21909.1 Da
IEP (calculated)
4.289
GRAVY (calculated)
0.129
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQAVEPRSR DRVSRMFRTG AEMGLTVCRS WAFNDDTYNA LQVSPGHFDE RIFKEWLVAV KVISSWSGSV IMLMFDPYLN TDASTMSPFE HDEVSVLDNG
101: AFTHFTFLGI KDIKIVHSSY DVGVILQTHS MKICSQVDLC NFDGLMVSSE DCVLVGQGYG LTETCAGAAF IEWDDTTSLL LCEGLFYKFD VCWIC
101: AFTHFTFLGI KDIKIVHSSY DVGVILQTHS MKICSQVDLC NFDGLMVSSE DCVLVGQGYG LTETCAGAAF IEWDDTTSLL LCEGLFYKFD VCWIC
001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
Arabidopsis Description
MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.