Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- vacuole 3
- extracellular 1
- golgi 2
- plasma membrane 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93344 | Sorghum | mitochondrion | 78.36 | 76.67 |
| Os05t0319100-00 | Rice | extracellular | 57.92 | 58.86 |
| Zm00001d005052_P002 | Maize | plasma membrane | 40.08 | 46.19 |
| Zm00001d043965_P001 | Maize | extracellular, vacuole | 39.08 | 45.77 |
| Zm00001d043443_P001 | Maize | plasma membrane | 36.47 | 40.18 |
| Zm00001d052158_P001 | Maize | golgi, vacuole | 33.87 | 38.15 |
| Zm00001d034723_P001 | Maize | vacuole | 36.47 | 37.92 |
| Zm00001d045873_P002 | Maize | vacuole | 31.46 | 36.09 |
| Zm00001d035984_P001 | Maize | cytosol | 11.02 | 28.21 |
Protein Annotations
| MapMan:21.2.3.2.2 | Gene3D:3.20.20.80 | UniProt:A0A1D6LEQ2 | ProteinID:AQK78426.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | PFAM:PF00150 |
| PANTHER:PTHR31451 | PANTHER:PTHR31451:SF17 | SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0008440BD4 | EnsemblPlantsGene:Zm00001d035149 |
| EnsemblPlants:Zm00001d035149_P001 | EnsemblPlants:Zm00001d035149_T001 | SEG:seg | : | : | : |
Description
Putative endo-1%2C4-beta-mannosidase family protein
Coordinates
chr6:-:7048494..7050657
Molecular Weight (calculated)
55341.2 Da
IEP (calculated)
6.673
GRAVY (calculated)
-0.298
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: METVFKWRAR TGGGVSLIHL LVRCFAVSAA ILLLADGRHA DAVDPAAPVE IQQTGSSSEV ADEQQWRMVR TRGNQFVVGD DDDHRPFYVN GFNTYWLMIL
101: AVDPSTRGKV TEVFQQAAAA GLTVCRTWAF NDGGWRALQK SPSVYDQDVF KALDFVVSEA RKYRIRLILS LINNWDSYGG KAQYVKWAGD DAAADGGRLN
201: ITASVDDDFF SDQTVKVYFK NHVKNMLTRV NTYTSVMYKD DPTIFAWELM NEPRCTSDPA GNKLQVRVRV DPRDGVPCEV HRPGPPAGSW RLGAEGFYGP
301: SSPSRLPANP NAYAGQVGTD FIRNHRVLGV DFASVHIYPD TWMPGATLEA RLWFVDSWME AHIADADGTL GMPVVFTEFG ASTTKARSGC FNATTRDQFI
401: QAVYARLLNS TRRGGAGAGA LLWQMLPLGT DYMDDGYGVV LPRAAATARI ISAHSRDLAI FNSRCAWSCR WGCRRRGHKS EDPDVDDDLP LVEDKQREA
101: AVDPSTRGKV TEVFQQAAAA GLTVCRTWAF NDGGWRALQK SPSVYDQDVF KALDFVVSEA RKYRIRLILS LINNWDSYGG KAQYVKWAGD DAAADGGRLN
201: ITASVDDDFF SDQTVKVYFK NHVKNMLTRV NTYTSVMYKD DPTIFAWELM NEPRCTSDPA GNKLQVRVRV DPRDGVPCEV HRPGPPAGSW RLGAEGFYGP
301: SSPSRLPANP NAYAGQVGTD FIRNHRVLGV DFASVHIYPD TWMPGATLEA RLWFVDSWME AHIADADGTL GMPVVFTEFG ASTTKARSGC FNATTRDQFI
401: QAVYARLLNS TRRGGAGAGA LLWQMLPLGT DYMDDGYGVV LPRAAATARI ISAHSRDLAI FNSRCAWSCR WGCRRRGHKS EDPDVDDDLP LVEDKQREA
001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
Arabidopsis Description
MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.