Factsheet for Os05t0319100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 3
peroxisome 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	cytosol, peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93344	Sorghum	mitochondrion	63.75	61.37
Os11t0118200-01	Rice	cytosol	24.24	58.91
Zm00001d035149_P001	Maize	vacuole	58.86	57.92
Os12t0117300-00	Rice	cytosol	42.36	54.45
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	39.1	47.64
Os03t0828300-01	Rice	extracellular, vacuole	17.11	44.44
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	39.92	44.04
Os06t0311600-01	Rice	golgi, vacuole	37.07	41.36
Os03t0828500-01	Rice	plasma membrane, plastid, vacuole	37.07	39.48
Os02t0766900-00	Rice	extracellular, golgi, vacuole	23.63	27.17

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	ProteinID:AAV44080.1	ProteinID:AAV44120.1	ProteinID:BAS93345.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:Os05g0319100
EnsemblPlants:Os05t0319100-00	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF17	UniProt:Q5W6G0	SUPFAM:SSF51445
TMHMM:TMhelix	UniParc:UPI0000EF88E2	SEG:seg	:	:	:

Description

MAN5Putative mannan endo-1,4-beta-mannosidase 5. (Os05t0319100-00)

Coordinates

chr5:+:14816350..14818668

Molecular Weight (calculated)

53467.8 Da

IEP (calculated)

5.783

GRAVY (calculated)

-0.107

Length

491 amino acids

Sequence
(BLAST)

001: METSYREEEA RRKASLLHCI FFFLLGALAM AAAIAVLHES SYWEWRCNRL TDIVVDGDDG DGPSSSEVVD GGGEWGMVRT RGAQFVVGGG RPFYVNGFNT
101: YWLMVLAVDP STRGKVTEVF RQAAAVGLTV CRTWAFNDGG WRALQKSPGV YDEEVFKALD FVVSEARKHK IRLILPLINN WDDYGGKAQY VRWAQAAAAG
201: AGADAFFSDE TVRGYFKSHV TAVLTRVNAY TGVAYRDDPT IMAWELMNEP RCASDPTGDT LQAWIAEMAF HVKSVDPAHL LGVGAEGFYG PSSPPARLRV
301: NPNADVALAG ADFVRNHRVL GVDFASVHVY PDTWLPAGAT KEAQLRFATS WVEAHIADAE GALGGMPVLF AEFGVSTRGA RAAFNATSRD AFIEAVYGAM
401: LRSTRRGGGG AGALLWQVFP EGTDYMDDGY AVVLPRAAAT AGIVAAHSRR LQSFNSRCAW SCRWGCNKRD NDTAETTTAE ADVDVSFHHE L

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.