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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003118.1-P
Bra004879.1-P
Bra011357.1-P
Bra012346.1-P
Bra012478.1-P
Bra016529.1-P
Bra016661.1-P
Bra021487.1-P
Bra023825.1-P
Bra024392.1-P
Bra024541.1-P
Bra026137.1-P
Bra026767.1-P
Bra028713.1-P
Bra029112.1-P
Bra029720.1-P
Bra038128.1-P
Bra038549.1-P
Bra038816.1-P
Bra039138.1-P
Bra039470.1-P
Bra039676.1-P
Bra040086.1-P
Bra040332.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G32190.1 Bra016661.1-P AT1G15385.1 21798944
AT4G32190.1 Bra026137.1-P AT1G15385.1 21798944
AT4G32190.1 Bra026767.1-P AT1G15385.1 21798944
AT4G32190.1 Bra039470.1-P AT1G15720.1 21798944
AT4G32190.1 Bra016529.1-P AT1G19010.1 21798944
AT4G32190.1 Bra012346.1-P AT1G22840.1 21798944
AT4G32190.1 Bra024541.1-P AT1G22840.1 21798944
AT4G32190.1 Bra012478.1-P AT1G25420.1 21798944
AT4G32190.1 Bra038128.1-P AT1G53510.1 21798944
AT4G32190.1 Bra039676.1-P AT1G53510.1 21798944
AT4G32190.1 Bra038549.1-P AT2G18730.1 21798944
AT4G32190.1 Bra038816.1-P AT2G18730.1 21798944
AT4G32190.1 Bra004879.1-P AT2G44950.1 21798944
AT4G32190.1 Bra040332.1-P AT2G44950.1 21798944
AT4G32190.1 Bra021487.1-P AT3G01180.1 21798944
AT4G32190.1 Bra039138.1-P AT3G01180.1 21798944
AT4G32190.1 Bra029720.1-P AT3G08780.1 21798944
AT4G32190.1 Bra023825.1-P AT3G22440.1 21798944
AT4G32190.1 Bra011357.1-P AT4G32570.1 21798944
AT4G32190.1 Bra040086.1-P AT4G32570.1 21798944
AT4G32190.1 Bra028713.1-P AT5G06960.1 21798944
AT4G32190.1 Bra003118.1-P AT5G52650.1 21798944
AT4G32190.1 Bra029112.1-P AT5G52650.1 21798944
AT4G32190.1 Bra024392.1-P AT5G65495.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75227 Canola plastid 97.61 97.61
CDY61790 Canola endoplasmic reticulum, extracellular 41.83 83.33
AT4G32190.1 Thale cress plastid 72.38 69.6
VIT_04s0008g05610.t01 Wine grape plastid 52.06 50.65
KRH05183 Soybean plastid 48.47 47.77
KRH15859 Soybean endoplasmic reticulum, vacuole 45.42 47.63
Bra023156.1-P Field mustard cytosol 9.96 45.45
PGSC0003DMT400010993 Potato plastid 45.02 44.03
Solyc08g022030.2.1 Tomato nucleus 44.36 43.38
Os02t0186400-01 Rice plastid 32.01 31.59
HORVU6Hr1G036020.1 Barley plastid 32.01 31.14
TraesCS6A01G180500.1 Wheat plastid 31.74 30.92
Zm00001d053726_P001 Maize plastid 31.21 30.48
TraesCS6D01G164600.1 Wheat plastid 31.08 30.27
EES06399 Sorghum plastid 30.81 29.97
Bra030239.1-P Field mustard nucleus 13.81 19.3
GSMUA_AchrUn_... Banana mitochondrion 5.31 17.62
Protein Annotations
EnsemblPlants:Bra011328.1EnsemblPlants:Bra011328.1-PEnsemblPlantsGene:Bra011328ncoils:CoilPANTHER:PTHR23160PANTHER:PTHR23160:SF11
SEG:segUniParc:UPI0002546619UniProt:M4D4C4MapMan:3.2.1.3::
Description
AT4G32190 (E=6e-175) | centromeric protein-related
Coordinates
chrA01:-:2708976..2711497
Molecular Weight (calculated)
86415.9 Da
IEP (calculated)
4.573
GRAVY (calculated)
-0.678
Length
753 amino acids
Sequence
(BLAST)
001: MGFSQAIRLN LSSYSSLSPC QTSVNQKQKT LVTFLTSCRK GKRRSLLTVK SVLNNTRPSF NDNGTADEPS KILLDKLFAR TQEQTNENSV YPPYSSLGGL
101: ESDLQAALMA LLKREEDLQD AERKVLSEKK KLNKAKEGLE KRERVILQAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEELVA VQASLTFKER
201: ELDRMRVEIS IKTKEASVAS FEFENKSQLL IQANEIVERQ EDEIEALQRA LKEKEEELEI ATAAKKLEQE KLRETEANLK KQTEEWLVAQ EEVSKLQEET
301: AKRLGEANET MEDFRRVRKL LTDVRFELVS SREVLLSSRE QMGEKEVLLE KQLEELEEQR RSVLSYMQSL RDARGEVESE RVKLRVAEAK NFALEREISI
401: QKELLEELRE ELKKEKSLLE QAMHDVSTIQ DELDKKTNEF QVSQTLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELTEARNQLE VVNREVSELK
501: MLMRTREDQL TEATELLKEK DVHLNRIEDE LGSSKIQASE AEMVVERIAE LTSRLVQDQM QQQPLEKQPY GDYGMENKRL VMELNFTREN LRLKEMEVLA
601: AQRALTLKDE EINVLMGRLE AKEQEVKKLK QETVNDGEDL KMLYALAQER IEGRTMGDLA IEKLQLEAAQ LEVEAATSAL QKLAEMSTEL LTQVDMSVEV
701: DSDFAVVPEN ENSSADCIAE VKSEVGRLWS LTEKLLENAG IVDGTTSTCI NGL
Best Arabidopsis Sequence Match ( AT4G32190.1 )
(BLAST)
001: MGFSQAIRLN LASFSSPSPC DYCLTRVVNH KQKSLVAFPS ITRRKRHLLL SVQSVLHNTR PNINDNGSAE SANVLFDKLF ARTHRLERQT NQHSVYPDDD
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
Arabidopsis Description
Myosin heavy chain-related protein [Source:UniProtKB/TrEMBL;Acc:Q8H1E5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.