Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G180500.1 | Wheat | plastid | 89.41 | 89.52 |
| TraesCS6D01G164600.1 | Wheat | plastid | 88.63 | 88.75 |
| Os02t0186400-01 | Rice | plastid | 68.48 | 69.46 |
| EES06399 | Sorghum | plastid | 63.7 | 63.7 |
| Zm00001d053726_P001 | Maize | plastid | 62.02 | 62.26 |
| CDX81488 | Canola | cytosol, nucleus, plastid | 7.36 | 37.25 |
| VIT_04s0008g05610.t01 | Wine grape | plastid | 34.75 | 34.75 |
| CDX75227 | Canola | plastid | 31.91 | 32.8 |
| KRH15859 | Soybean | endoplasmic reticulum, vacuole | 29.97 | 32.31 |
| CDX68825 | Canola | plastid | 31.27 | 32.14 |
| PGSC0003DMT400010993 | Potato | plastid | 31.91 | 32.08 |
| Bra011328.1-P | Field mustard | plastid | 31.14 | 32.01 |
| Solyc08g022030.2.1 | Tomato | nucleus | 31.65 | 31.82 |
| KRH05183 | Soybean | plastid | 31.14 | 31.54 |
| CDY61791 | Canola | nucleus | 6.2 | 30.97 |
| CDX81487 | Canola | cytosol | 8.91 | 30.94 |
| AT4G32190.1 | Thale cress | plastid | 31.14 | 30.78 |
| CDX81489 | Canola | nucleus | 5.81 | 28.48 |
| CDY61790 | Canola | endoplasmic reticulum, extracellular | 12.92 | 26.45 |
| CDY02356 | Canola | cytosol | 4.52 | 21.21 |
| Bra023156.1-P | Field mustard | cytosol | 4.52 | 21.21 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 6.07 | 20.7 |
| CDY35289 | Canola | nucleus | 5.68 | 11.76 |
| Bra030239.1-P | Field mustard | nucleus | 6.98 | 10.02 |
| CDX95298 | Canola | nucleus | 7.11 | 5.53 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G036020.1 | EnsemblPlantsGene:HORVU6Hr1G036020 | ncoils:Coil | PANTHER:PTHR23160 | PANTHER:PTHR23160:SF11 | SEG:seg |
| UniParc:UPI0002949E5A | UniProt:M0XPB4 | MapMan:3.2.1.3 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:176038676..176043484
Molecular Weight (calculated)
87867.1 Da
IEP (calculated)
4.864
GRAVY (calculated)
-0.626
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSTGCPSP SPAAALAAAH RSTSPSCRTA THVMFRHKLS FMVAFQTQHL KYAPCLIKSV VKSIRSNITD GDNGTTEPAR ELLERLFAKT QSLDTGASND
101: SELGVSIEVL KSEFEGALSI LRKKERDLRN AEKRVSDDRT RLSKTKQDLD QREETIRKVY VRQQDIEKAL KRASRDLALR VKQISNLKLL VEGQDRTIAS
201: SQALLSQKVI EVENLKQDMF TKNEEADLMR SEIKSKEQLL LTANQAVVQQ EATVRELQSE IKRKIIDIAR SDELRKTNED KLKVAEQELE KQNLGWLAAQ
301: QELKELAQLA SDDTDDIKGI ITDFKRVRSL LDVVRSELIS SKDAFASSRR QIEDQAVQLR EQVQELEDQR VLLMSHTHDL EAARLEIQGK TQELNYAQSR
401: CHELESHLLQ EMEKVESLEA ELTKERQSLE HRTEEVDFLQ KELVQKENEC TKSQELVKVK EFELLEARYE VQDMKLKVES IQLAVQEKDS ELSATQSRLT
501: EVSSEVVKLQ QLLNSKEDQL VQARTELHDK EQHIETLESE LDSIRLRCSQ AESVVQRMAE LTGDLASSVK TGETDIYTLL DDEIASAGTT LESNLHKHNQ
601: LEADIEMLRE CLRHKDMDLR AAHEALDAKD QELKAVLKKW DVKERELHEL EELLDPSATN ELACFSNETT EGGVVGEMEL QELQIGAAEV EALAATTALR
701: KLADMTKDLF KHDKGDSGID LAASGSQKLR NCDSKMEVHK KTDVILEAEK EITRLFSLTK QIVTDDIIND VDER
101: SELGVSIEVL KSEFEGALSI LRKKERDLRN AEKRVSDDRT RLSKTKQDLD QREETIRKVY VRQQDIEKAL KRASRDLALR VKQISNLKLL VEGQDRTIAS
201: SQALLSQKVI EVENLKQDMF TKNEEADLMR SEIKSKEQLL LTANQAVVQQ EATVRELQSE IKRKIIDIAR SDELRKTNED KLKVAEQELE KQNLGWLAAQ
301: QELKELAQLA SDDTDDIKGI ITDFKRVRSL LDVVRSELIS SKDAFASSRR QIEDQAVQLR EQVQELEDQR VLLMSHTHDL EAARLEIQGK TQELNYAQSR
401: CHELESHLLQ EMEKVESLEA ELTKERQSLE HRTEEVDFLQ KELVQKENEC TKSQELVKVK EFELLEARYE VQDMKLKVES IQLAVQEKDS ELSATQSRLT
501: EVSSEVVKLQ QLLNSKEDQL VQARTELHDK EQHIETLESE LDSIRLRCSQ AESVVQRMAE LTGDLASSVK TGETDIYTLL DDEIASAGTT LESNLHKHNQ
601: LEADIEMLRE CLRHKDMDLR AAHEALDAKD QELKAVLKKW DVKERELHEL EELLDPSATN ELACFSNETT EGGVVGEMEL QELQIGAAEV EALAATTALR
701: KLADMTKDLF KHDKGDSGID LAASGSQKLR NCDSKMEVHK KTDVILEAEK EITRLFSLTK QIVTDDIIND VDER
001: MGFSQAIRLN LASFSSPSPC DYCLTRVVNH KQKSLVAFPS ITRRKRHLLL SVQSVLHNTR PNINDNGSAE SANVLFDKLF ARTHRLERQT NQHSVYPDDD
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
Arabidopsis Description
Myosin heavy chain-related protein [Source:UniProtKB/TrEMBL;Acc:Q8H1E5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.