Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02356 | Canola | cytosol | 17.91 | 40.61 |
| CDX81489 | Canola | nucleus | 16.58 | 39.24 |
| CDY61790 | Canola | endoplasmic reticulum, extracellular | 20.32 | 20.11 |
| Bra030239.1-P | Field mustard | nucleus | 28.61 | 19.85 |
| CDX68825 | Canola | plastid | 21.39 | 10.62 |
| CDX75227 | Canola | plastid | 21.12 | 10.49 |
| KRH15859 | Soybean | endoplasmic reticulum, vacuole | 12.83 | 6.69 |
| VIT_04s0008g05610.t01 | Wine grape | plastid | 13.64 | 6.59 |
| PGSC0003DMT400010993 | Potato | plastid | 13.1 | 6.36 |
| KRH05183 | Soybean | plastid | 12.83 | 6.28 |
| Solyc08g022030.2.1 | Tomato | nucleus | 12.3 | 5.97 |
| Os02t0186400-01 | Rice | plastid | 12.03 | 5.9 |
| TraesCS6D01G164600.1 | Wheat | plastid | 11.76 | 5.69 |
| HORVU6Hr1G036020.1 | Barley | plastid | 11.76 | 5.68 |
| Zm00001d053726_P001 | Maize | plastid | 11.5 | 5.58 |
| EES06399 | Sorghum | plastid | 11.5 | 5.56 |
| TraesCS6A01G180500.1 | Wheat | plastid | 10.96 | 5.3 |
| CDX81488 | Canola | cytosol, nucleus, plastid | 2.14 | 5.23 |
| CDX95298 | Canola | nucleus | 10.96 | 4.12 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 1.6 | 2.64 |
| CDY61791 | Canola | nucleus | 0.8 | 1.94 |
| CDX81487 | Canola | cytosol | 0.53 | 0.9 |
Protein Annotations
| EnsemblPlants:CDY35289 | EnsemblPlantsGene:GSBRNA2T00058235001 | ncoils:Coil | PANTHER:PTHR23160 | PANTHER:PTHR23160:SF11 | ProteinID:CDY35289 |
| ProteinID:CDY35289.1 | UniParc:UPI0004EED20E | UniProt:A0A078HCU8 | MapMan:35.1 | : | : |
Description
BnaC03g59340DBnaC03g59340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCU8]
Coordinates
chrLK032349:-:234549..235673
Molecular Weight (calculated)
43101.5 Da
IEP (calculated)
8.157
GRAVY (calculated)
-0.556
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPASQAREI EELKHKLMER DEERVSMQSS SHLGDRELHH MSVEISIKWE KVSVVVSGTG NKSQFLSQTN EIVKRQEDEI HSLQRALKEK EEHFQMSIAE
101: KRLEHIQYLV QRENLERQRH MFRFKREGQL RDSVCTALYV DNDGILRVRF PGASRGLKAD PSELECVDEL KVDDWVRYDW FSVGKESIAA KFRGSHSVSE
201: NMVSVSVLSC EVTNGDTTSL SSLYSRAGFG IKDAISFAGD LKFLLNVSKA VGKFDIEEVS KISRIHGKFR DVIRSVYSDD EEHGKLKRKR RKWYLQKKEI
301: VVLCSCEADK VAGTEAVRQV LSHLIREYVE YDFILSKSLG KHLTFREMRR LTGAHEVCKD EFKLKGENVG ISLK
101: KRLEHIQYLV QRENLERQRH MFRFKREGQL RDSVCTALYV DNDGILRVRF PGASRGLKAD PSELECVDEL KVDDWVRYDW FSVGKESIAA KFRGSHSVSE
201: NMVSVSVLSC EVTNGDTTSL SSLYSRAGFG IKDAISFAGD LKFLLNVSKA VGKFDIEEVS KISRIHGKFR DVIRSVYSDD EEHGKLKRKR RKWYLQKKEI
301: VVLCSCEADK VAGTEAVRQV LSHLIREYVE YDFILSKSLG KHLTFREMRR LTGAHEVCKD EFKLKGENVG ISLK
001: MGFSQAIRLN LASFSSPSPC DYCLTRVVNH KQKSLVAFPS ITRRKRHLLL SVQSVLHNTR PNINDNGSAE SANVLFDKLF ARTHRLERQT NQHSVYPDDD
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
Arabidopsis Description
Myosin heavy chain-related protein [Source:UniProtKB/TrEMBL;Acc:Q8H1E5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.