Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g064950.1.1 | Tomato | nucleus | 100.0 | 100.0 |
| KRH36324 | Soybean | nucleus | 87.35 | 85.24 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 85.49 | 83.43 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 85.19 | 83.13 |
| Os01t0279900-01 | Rice | nucleus | 83.33 | 82.07 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 44.14 | 81.25 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 37.35 | 81.21 |
| EES02530 | Sorghum | nucleus | 81.48 | 80.0 |
| Os03t0318600-01 | Rice | nucleus | 82.1 | 79.88 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 81.48 | 79.76 |
| KXG36997 | Sorghum | nucleus | 81.79 | 79.58 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 81.48 | 79.52 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 81.48 | 79.52 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 81.48 | 79.52 |
| KXG39494 | Sorghum | nucleus | 82.1 | 79.4 |
| Zm00001d022542_P002 | Maize | nucleus | 81.48 | 79.28 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 81.17 | 78.51 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 81.17 | 78.51 |
| AT5G06950.5 | Thale cress | nucleus | 79.94 | 78.48 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 80.86 | 78.44 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 80.86 | 78.44 |
| Os07t0687700-01 | Rice | nucleus | 80.56 | 78.14 |
| Bra009241.1-P | Field mustard | nucleus | 74.69 | 78.06 |
| CDY08443 | Canola | nucleus | 79.63 | 77.95 |
| Bra034767.1-P | Field mustard | nucleus | 79.32 | 77.64 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 79.94 | 77.08 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 79.94 | 77.08 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 79.63 | 76.79 |
| CDX70053 | Canola | nucleus | 77.16 | 76.45 |
| CDX98971 | Canola | nucleus | 77.16 | 76.22 |
| AT5G06960.1 | Thale cress | nucleus | 77.47 | 76.06 |
| Bra038705.1-P | Field mustard | nucleus | 78.09 | 75.75 |
| CDY50562 | Canola | nucleus | 78.09 | 75.75 |
| CDY52616 | Canola | nucleus | 77.78 | 75.68 |
| CDX73830 | Canola | nucleus | 76.85 | 75.23 |
| Bra001443.1-P | Field mustard | nucleus | 76.85 | 75.23 |
| CDY00762 | Canola | nucleus | 76.54 | 74.92 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 77.78 | 74.78 |
| Bra028713.1-P | Field mustard | nucleus | 73.77 | 73.31 |
| CDY14061 | Canola | nucleus | 73.77 | 73.31 |
| CDY05010 | Canola | nucleus | 73.46 | 73.01 |
| AT3G12250.4 | Thale cress | nucleus | 78.7 | 71.83 |
| CDY42138 | Canola | nucleus | 68.21 | 68.21 |
| PGSC0003DMT400060922 | Potato | nucleus | 54.94 | 66.42 |
| KXG22247 | Sorghum | nucleus | 67.28 | 65.66 |
| KRG93068 | Soybean | nucleus | 87.65 | 63.96 |
| Os05t0492000-00 | Rice | nucleus | 65.12 | 63.94 |
| Zm00001d008225_P001 | Maize | nucleus | 81.79 | 63.1 |
| Zm00001d028936_P001 | Maize | nucleus | 74.69 | 61.89 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 89.51 | 61.83 |
| GSMUA_Achr10P... | Banana | nucleus | 85.19 | 60.39 |
| Zm00001d010658_P001 | Maize | nucleus | 63.58 | 59.71 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 61.11 | 59.1 |
| KRH20680 | Soybean | nucleus | 85.19 | 58.85 |
| PGSC0003DMT400060926 | Potato | nucleus | 78.4 | 58.66 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 61.11 | 58.41 |
| GSMUA_Achr11P... | Banana | nucleus | 85.49 | 57.95 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 60.8 | 57.94 |
| EES03778 | Sorghum | nucleus | 82.1 | 56.84 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 81.48 | 55.58 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 81.79 | 55.56 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 81.48 | 55.35 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 81.17 | 55.14 |
| KRH13334 | Soybean | nucleus | 84.57 | 55.13 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 57.41 | 54.23 |
| Zm00001d043153_P001 | Maize | nucleus | 66.36 | 50.95 |
| PGSC0003DMT400067782 | Potato | nucleus | 50.62 | 49.85 |
| Zm00001d012553_P003 | Maize | nucleus | 70.99 | 48.94 |
| PGSC0003DMT400033741 | Potato | nucleus | 71.91 | 48.24 |
| PGSC0003DMT400033308 | Potato | nucleus | 52.78 | 48.03 |
| PGSC0003DMT400029743 | Potato | nucleus, plastid | 56.17 | 47.89 |
| PGSC0003DMT400043651 | Potato | nucleus | 53.09 | 47.65 |
| PGSC0003DMT400070884 | Potato | nucleus | 52.78 | 47.37 |
| PGSC0003DMT400016235 | Potato | nucleus | 55.25 | 45.66 |
| Os01t0808100-01 | Rice | nucleus | 47.84 | 42.58 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 44.75 | 41.31 |
| PGSC0003DMT400018306 | Potato | nucleus | 60.19 | 39.96 |
| PGSC0003DMT400060865 | Potato | nucleus | 55.56 | 39.05 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR004827 | InterPro:IPR025422 | UniProt:M1AK43 | PFAM:PF00170 | PFAM:PF14144 | EnsemblPlantsGene:PGSC0003DMG400009449 |
| PGSC:PGSC0003DMG400009449 | EnsemblPlants:PGSC0003DMT400024428 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF244 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI00027697FF | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BZIP transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400009449]
Coordinates
chr11:-:35946412..35954327
Molecular Weight (calculated)
36173.0 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.498
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MADISPSTST DADTEDKNRF LNQQLCAVAS DGSDRPKDQK TLRRLAQNRE AARKSRLRKK AYVQQLESSR MKLTQLEQEL QRARQQGIFI SGSGDQSQSM
101: SGNGALAFDV EYARWLEEQN RRINELRGAV NSHAGDAELR IIVDGILAHY DDIFRIKGDA AKADVFHILS GMWKTPAERC FLWLGGFRSS ELLKLLINQL
201: EPLTEQQLLA INNLQQSSQQ AEDALSQGME ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL EGFIRQADNL RQQTLQQMHR ILTTRQSARA
301: LLAITDYFSR LRALSSLWLA RPRE
101: SGNGALAFDV EYARWLEEQN RRINELRGAV NSHAGDAELR IIVDGILAHY DDIFRIKGDA AKADVFHILS GMWKTPAERC FLWLGGFRSS ELLKLLINQL
201: EPLTEQQLLA INNLQQSSQQ AEDALSQGME ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL EGFIRQADNL RQQTLQQMHR ILTTRQSARA
301: LLAITDYFSR LRALSSLWLA RPRE
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Arabidopsis Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.