Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001443.1-P | Field mustard | nucleus | 99.09 | 99.09 |
| CDX73830 | Canola | nucleus | 99.09 | 99.09 |
| CDY08443 | Canola | nucleus | 94.26 | 94.26 |
| CDY50562 | Canola | nucleus | 94.86 | 94.01 |
| CDY52616 | Canola | nucleus | 94.26 | 93.69 |
| CDX70053 | Canola | nucleus | 89.12 | 90.21 |
| CDX98971 | Canola | nucleus | 89.12 | 89.94 |
| AT3G12250.4 | Thale cress | nucleus | 94.26 | 87.89 |
| CDY42138 | Canola | nucleus | 81.57 | 83.33 |
| CDY14061 | Canola | nucleus | 79.46 | 80.67 |
| CDY05010 | Canola | nucleus | 79.15 | 80.37 |
| Os01t0279900-01 | Rice | nucleus | 78.25 | 78.72 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 78.25 | 78.01 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 78.25 | 78.01 |
| KRH36324 | Soybean | nucleus | 77.34 | 77.11 |
| Solyc11g064950.1.1 | Tomato | nucleus | 74.92 | 76.54 |
| PGSC0003DMT400024428 | Potato | nucleus | 74.92 | 76.54 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 76.44 | 76.2 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 76.44 | 76.2 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 76.13 | 76.13 |
| EES02530 | Sorghum | nucleus | 75.53 | 75.76 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 75.83 | 75.6 |
| KXG39494 | Sorghum | nucleus | 75.23 | 74.33 |
| Os07t0687700-01 | Rice | nucleus | 74.62 | 73.95 |
| Os03t0318600-01 | Rice | nucleus | 74.02 | 73.57 |
| KXG36997 | Sorghum | nucleus | 73.72 | 73.27 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 73.72 | 73.05 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 73.72 | 73.05 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 73.72 | 72.84 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 73.72 | 72.84 |
| Solyc01g008730.2.1 | Tomato | nucleus | 71.9 | 72.78 |
| Zm00001d022542_P002 | Maize | nucleus | 73.11 | 72.67 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 73.41 | 72.32 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 73.41 | 72.32 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 73.41 | 72.32 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 31.72 | 70.47 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 70.69 | 69.44 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 36.25 | 68.18 |
| KXG22247 | Sorghum | nucleus | 63.44 | 63.25 |
| Os05t0492000-00 | Rice | nucleus | 61.63 | 61.82 |
| Zm00001d010658_P001 | Maize | nucleus | 62.24 | 59.71 |
| Zm00001d008225_P001 | Maize | nucleus | 75.53 | 59.52 |
| KRG93068 | Soybean | nucleus | 77.64 | 57.88 |
| Zm00001d028936_P001 | Maize | nucleus | 67.67 | 57.29 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 79.46 | 56.08 |
| GSMUA_Achr10P... | Banana | nucleus | 76.74 | 55.58 |
| KRH20680 | Soybean | nucleus | 78.25 | 55.22 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 55.59 | 54.93 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 56.19 | 54.71 |
| GSMUA_Achr11P... | Banana | nucleus | 78.25 | 54.18 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 76.74 | 53.47 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 77.04 | 53.46 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 54.68 | 53.39 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 76.74 | 53.25 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 76.44 | 53.04 |
| EES03778 | Sorghum | nucleus | 74.92 | 52.99 |
| KRH13334 | Soybean | nucleus | 77.04 | 51.31 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 51.06 | 49.27 |
| Zm00001d043153_P001 | Maize | nucleus | 60.73 | 47.63 |
| CDY71150 | Canola | nucleus, plastid | 28.1 | 46.97 |
| CDX95999 | Canola | nucleus | 61.93 | 46.38 |
| CDY38608 | Canola | nucleus | 61.93 | 46.38 |
| CDX68037 | Canola | nucleus | 51.66 | 46.09 |
| CDY70396 | Canola | mitochondrion | 29.0 | 45.93 |
| Zm00001d012553_P003 | Maize | nucleus | 64.95 | 45.74 |
| CDX85782 | Canola | nucleus | 49.85 | 45.58 |
| CDY08810 | Canola | nucleus | 50.45 | 45.5 |
| CDX69866 | Canola | nucleus | 49.85 | 45.33 |
| CDY40074 | Canola | nucleus | 49.55 | 45.3 |
| CDY41495 | Canola | nucleus | 50.15 | 44.99 |
| CDY37811 | Canola | nucleus | 50.15 | 44.86 |
| CDY33975 | Canola | nucleus | 50.15 | 44.86 |
| CDY21625 | Canola | nucleus | 49.24 | 44.78 |
| CDY14552 | Canola | nucleus | 49.55 | 44.69 |
| CDY38843 | Canola | nucleus | 49.24 | 44.05 |
| CDY38253 | Canola | nucleus | 50.45 | 43.38 |
| CDY22689 | Canola | nucleus | 54.68 | 42.29 |
| CDY18683 | Canola | cytosol | 47.43 | 42.2 |
| CDX81273 | Canola | nucleus | 49.24 | 41.9 |
| Os01t0808100-01 | Rice | nucleus | 45.92 | 41.76 |
| CDX88399 | Canola | nucleus | 53.17 | 40.93 |
| CDX87494 | Canola | nucleus | 54.38 | 40.54 |
| CDY70714 | Canola | nucleus | 42.6 | 40.06 |
| CDY21336 | Canola | nucleus | 50.45 | 39.95 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 41.99 | 39.6 |
| CDY70235 | Canola | nucleus | 42.9 | 39.01 |
| CDX95068 | Canola | nucleus | 55.59 | 38.49 |
| CDX93571 | Canola | nucleus | 55.29 | 38.28 |
| CDX70061 | Canola | nucleus | 51.96 | 38.14 |
| CDX98963 | Canola | nucleus | 51.66 | 37.92 |
| CDY06309 | Canola | nucleus | 54.98 | 37.6 |
| CDY00417 | Canola | mitochondrion | 19.34 | 27.59 |
| CDX79240 | Canola | nucleus | 45.32 | 26.32 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | GO:A0A078EHZ3 | EnsemblPlants:CDY00762 |
| ProteinID:CDY00762 | ProteinID:CDY00762.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00110643001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EAFD07 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC03g37460D
Coordinates
chrLK031921:+:1027299..1029205
Molecular Weight (calculated)
36759.4 Da
IEP (calculated)
9.423
GRAVY (calculated)
-0.598
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTSSRTDA STDGDTDPRD MGSERGQGML AAASDSSGRS KDKLDQKTVR RLAQNREAAR KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGVFISSS
101: GDQAHSTGGN GALAFDAEHS RWLEEKNKQM NELRSALNAH AGDTELRIIV EGVMSHYEEL FRIKSSAAKN DVFHLLSGMW KTPAERCFLW LGGFRSSELL
201: KLIANQLEPI TERQVMGLNS LQQTSQQAED ALSQGMESLQ QSLADTLSSG TLGSSSSDNV ASYMGQMAMA MGQLGTLEGF IRQADNLRLQ TLQQMIRVLT
301: TRQSARAFLA IHDYSSRLRA LSSLWLARPR E
101: GDQAHSTGGN GALAFDAEHS RWLEEKNKQM NELRSALNAH AGDTELRIIV EGVMSHYEEL FRIKSSAAKN DVFHLLSGMW KTPAERCFLW LGGFRSSELL
201: KLIANQLEPI TERQVMGLNS LQQTSQQAED ALSQGMESLQ QSLADTLSSG TLGSSSSDNV ASYMGQMAMA MGQLGTLEGF IRQADNLRLQ TLQQMIRVLT
301: TRQSARAFLA IHDYSSRLRA LSSLWLARPR E
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.