Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031364.1-P | Field mustard | nucleus | 96.88 | 98.68 |
| CDY21336 | Canola | nucleus | 97.4 | 89.71 |
| CDY41495 | Canola | nucleus | 85.71 | 89.43 |
| AT1G22070.1 | Thale cress | nucleus | 88.83 | 89.06 |
| CDY38843 | Canola | nucleus | 84.42 | 87.84 |
| CDX68037 | Canola | nucleus | 71.95 | 74.66 |
| VIT_18s0001g04470.t01 | Wine grape | nucleus | 62.34 | 66.12 |
| CDX88399 | Canola | nucleus | 73.51 | 65.81 |
| CDX87494 | Canola | nucleus | 73.25 | 63.51 |
| Solyc04g072460.2.1 | Tomato | nucleus | 56.88 | 60.66 |
| PGSC0003DMT400070884 | Potato | nucleus | 56.62 | 60.39 |
| Solyc12g056860.1.1 | Tomato | nucleus | 54.29 | 60.06 |
| PGSC0003DMT400043651 | Potato | nucleus | 55.58 | 59.28 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 55.84 | 58.9 |
| CDY08810 | Canola | nucleus | 56.1 | 58.86 |
| CDY33975 | Canola | nucleus | 55.58 | 57.84 |
| CDY37811 | Canola | nucleus | 55.32 | 57.57 |
| CDX85782 | Canola | nucleus | 54.03 | 57.46 |
| CDY14552 | Canola | nucleus | 54.55 | 57.22 |
| CDY40074 | Canola | nucleus | 53.77 | 57.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.47 | 57.06 |
| GSMUA_Achr10P... | Banana | nucleus | 50.91 | 55.84 |
| CDY18683 | Canola | cytosol | 53.77 | 55.65 |
| KRH63045 | Soybean | cytosol | 13.51 | 55.32 |
| KRH53141 | Soybean | nucleus | 50.91 | 55.21 |
| CDX69866 | Canola | nucleus | 51.69 | 54.67 |
| CDX81273 | Canola | nucleus | 55.06 | 54.5 |
| KRH16629 | Soybean | nucleus | 51.95 | 54.05 |
| KRH18838 | Soybean | nucleus | 51.69 | 53.78 |
| KRH64780 | Soybean | nucleus | 50.39 | 53.59 |
| CDY21625 | Canola | nucleus | 49.87 | 52.75 |
| CDY14061 | Canola | nucleus | 44.16 | 52.15 |
| CDY05010 | Canola | nucleus | 44.16 | 52.15 |
| CDX70053 | Canola | nucleus | 43.64 | 51.38 |
| CDY08443 | Canola | nucleus | 44.16 | 51.36 |
| CDX98971 | Canola | nucleus | 43.64 | 51.22 |
| CDY50562 | Canola | nucleus | 43.9 | 50.6 |
| CDX73830 | Canola | nucleus | 43.38 | 50.45 |
| CDY00762 | Canola | nucleus | 43.38 | 50.45 |
| CDY52616 | Canola | nucleus | 43.64 | 50.45 |
| Zm00001d016312_P001 | Maize | cytosol | 11.69 | 48.39 |
| Os04t0637000-01 | Rice | nucleus | 48.05 | 46.6 |
| CDY71150 | Canola | nucleus, plastid | 23.64 | 45.96 |
| KXG27222 | Sorghum | nucleus | 48.31 | 45.59 |
| CDY70396 | Canola | mitochondrion | 24.16 | 44.5 |
| CDX79240 | Canola | nucleus | 64.94 | 43.86 |
| CDY42138 | Canola | nucleus | 36.36 | 43.21 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 46.75 | 42.96 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 47.27 | 42.82 |
| Zm00001d026398_P006 | Maize | nucleus | 45.71 | 42.72 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 48.05 | 42.53 |
| KXG38496 | Sorghum | nucleus | 33.51 | 41.48 |
| Zm00001d024160_P003 | Maize | nucleus | 44.42 | 40.33 |
| CDY22689 | Canola | nucleus | 44.16 | 39.72 |
| Zm00001d002143_P002 | Maize | cytosol | 44.42 | 38.95 |
| CDY70714 | Canola | nucleus | 35.58 | 38.92 |
| CDX70061 | Canola | nucleus | 44.42 | 37.92 |
| CDY70235 | Canola | nucleus | 35.84 | 37.91 |
| CDX98963 | Canola | nucleus | 44.16 | 37.69 |
| Zm00001d041428_P001 | Maize | cytosol | 15.06 | 37.18 |
| CDY00417 | Canola | mitochondrion | 22.34 | 37.07 |
| CDX95999 | Canola | nucleus | 42.34 | 36.88 |
| CDY38608 | Canola | nucleus | 41.82 | 36.43 |
| CDX95068 | Canola | nucleus | 45.19 | 36.4 |
| CDX93571 | Canola | nucleus | 44.94 | 36.19 |
| CDY06309 | Canola | nucleus | 44.94 | 35.74 |
| Os08t0176900-01 | Rice | nucleus | 34.81 | 34.45 |
| OQU79985 | Sorghum | golgi, vacuole | 44.94 | 33.53 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 30.91 | 28.13 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078HN56 | UniProt:A0A078HN56 | EnsemblPlants:CDY38253 |
| ProteinID:CDY38253 | ProteinID:CDY38253.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00065604001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF07716 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF180 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE56E2 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC05g17700DBnaC05g17700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN56]
Coordinates
chrLK032419:-:332688..335456
Molecular Weight (calculated)
43534.1 Da
IEP (calculated)
6.015
GRAVY (calculated)
-0.640
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSSSSSSTT QVVSLREMGM YEPFQQLSGW ENAFNTIGSS NQNNNNNNNN PSSSTVPEVD ARADADDNNK ANYTSMYNNS VEAEPSSNND QDDDQINDKM
101: KRRLAQNREA ARKSRLRKKA HVQQLEESRL KLSQLEQELA RARQQGLCVR NSSDSSYLGP AGTMNTGIAA FEMEYTHWLE EQNKRVSEIR TALQAHISDI
201: ELKMLVDICL NNYANLFRMK ADAAKADVFF LISGMWRTST ERFFQWIGGF RPSELLNVVM PYIEPLTDQQ LLEVRNLQQS SQQAEEALSQ GLDKLQQGLV
301: ENIAVDIRVV ESVSHGAQMA SAMENLQALE GFVNQADHLR KQTLQQMSKI LTTRQAARGL LALGEYFHRL RALSSLWAAR PRERT
101: KRRLAQNREA ARKSRLRKKA HVQQLEESRL KLSQLEQELA RARQQGLCVR NSSDSSYLGP AGTMNTGIAA FEMEYTHWLE EQNKRVSEIR TALQAHISDI
201: ELKMLVDICL NNYANLFRMK ADAAKADVFF LISGMWRTST ERFFQWIGGF RPSELLNVVM PYIEPLTDQQ LLEVRNLQQS SQQAEEALSQ GLDKLQQGLV
301: ENIAVDIRVV ESVSHGAQMA SAMENLQALE GFVNQADHLR KQTLQQMSKI LTTRQAARGL LALGEYFHRL RALSSLWAAR PRERT
001: MEMMSSSSST TQVVSFRDMG MYEPFQQLSG WESPFKSDIN NITSNQNNNQ SSSTTLEVDA RPEADDNNRV NYTSVYNNSL EAEPSSNNDQ DEDRINDKMK
101: RRLAQNREAA RKSRLRKKAH VQQLEESRLK LSQLEQELVR ARQQGLCVRN SSDTSYLGPA GNMNSGIAAF EMEYTHWLEE QNRRVSEIRT ALQAHIGDIE
201: LKMLVDSCLN HYANLFRMKA DAAKADVFFL MSGMWRTSTE RFFQWIGGFR PSELLNVVMP YVEPLTDQQL LEVRNLQQSS QQAEEALSQG LDKLQQGLVE
301: SIAIQIKVVE SVNHGAPMAS AMENLQALES FVNQADHLRQ QTLQQMSKIL TTRQAARGLL ALGEYFHRLR ALSSLWAARP REHT
101: RRLAQNREAA RKSRLRKKAH VQQLEESRLK LSQLEQELVR ARQQGLCVRN SSDTSYLGPA GNMNSGIAAF EMEYTHWLEE QNRRVSEIRT ALQAHIGDIE
201: LKMLVDSCLN HYANLFRMKA DAAKADVFFL MSGMWRTSTE RFFQWIGGFR PSELLNVVMP YVEPLTDQQL LEVRNLQQSS QQAEEALSQG LDKLQQGLVE
301: SIAIQIKVVE SVNHGAPMAS AMENLQALES FVNQADHLRQ QTLQQMSKIL TTRQAARGLL ALGEYFHRLR ALSSLWAARP REHT
Arabidopsis Description
TGA3At1g22070 [Source:UniProtKB/TrEMBL;Acc:Q147Q9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.