Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028604.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY40074 | Canola | nucleus | 98.62 | 98.62 |
| AT5G10030.3 | Thale cress | nucleus | 91.44 | 90.93 |
| CDX69866 | Canola | nucleus | 91.44 | 90.93 |
| CDY21625 | Canola | nucleus | 89.23 | 88.74 |
| CDY33975 | Canola | nucleus | 84.25 | 82.43 |
| CDY08810 | Canola | nucleus | 83.15 | 82.02 |
| CDY37811 | Canola | nucleus | 83.43 | 81.62 |
| CDY14552 | Canola | nucleus | 81.49 | 80.38 |
| CDY18683 | Canola | cytosol | 79.56 | 77.42 |
| CDX81273 | Canola | nucleus | 81.49 | 75.84 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 70.72 | 73.35 |
| KRG97639 | Soybean | nucleus | 69.06 | 69.06 |
| KRH31239 | Soybean | nucleus | 68.23 | 67.86 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 63.26 | 62.74 |
| KRH59415 | Soybean | nucleus | 64.09 | 62.7 |
| KRH43266 | Soybean | nucleus | 64.92 | 62.01 |
| Solyc04g011670.2.1 | Tomato | nucleus | 62.71 | 60.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.56 | 59.89 |
| PGSC0003DMT400033308 | Potato | nucleus | 57.18 | 58.15 |
| Solyc04g054320.2.1 | Tomato | nucleus | 59.39 | 58.11 |
| Zm00001d016312_P001 | Maize | cytosol | 14.92 | 58.06 |
| GSMUA_Achr10P... | Banana | nucleus | 55.52 | 57.27 |
| CDY38843 | Canola | nucleus | 55.8 | 54.59 |
| PGSC0003DMT400016235 | Potato | nucleus | 59.12 | 54.59 |
| CDY41495 | Canola | nucleus | 55.52 | 54.47 |
| CDY38253 | Canola | nucleus | 57.46 | 54.03 |
| CDX68037 | Canola | nucleus | 55.25 | 53.91 |
| CDY08443 | Canola | nucleus | 47.24 | 51.66 |
| CDY50562 | Canola | nucleus | 46.96 | 50.9 |
| CDY52616 | Canola | nucleus | 46.69 | 50.75 |
| CDY14061 | Canola | nucleus | 45.58 | 50.61 |
| CDY05010 | Canola | nucleus | 45.58 | 50.61 |
| CDX98971 | Canola | nucleus | 45.86 | 50.61 |
| CDX70053 | Canola | nucleus | 45.58 | 50.46 |
| Os04t0637000-01 | Rice | nucleus | 54.97 | 50.13 |
| CDY00762 | Canola | nucleus | 45.58 | 49.85 |
| CDX73830 | Canola | nucleus | 45.58 | 49.85 |
| CDY21336 | Canola | nucleus | 57.18 | 49.52 |
| CDX88399 | Canola | nucleus | 56.08 | 47.21 |
| KXG27222 | Sorghum | nucleus | 53.04 | 47.06 |
| CDX87494 | Canola | nucleus | 56.91 | 46.4 |
| Zm00001d026398_P006 | Maize | nucleus | 52.21 | 45.87 |
| KXG38496 | Sorghum | nucleus | 38.67 | 45.02 |
| CDY42138 | Canola | nucleus | 40.06 | 44.75 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 51.38 | 44.39 |
| KRG92164 | Soybean | nucleus | 28.73 | 44.26 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 51.66 | 44.0 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 52.76 | 43.91 |
| CDY71150 | Canola | nucleus, plastid | 23.48 | 42.93 |
| Zm00001d024160_P003 | Maize | nucleus | 49.72 | 42.45 |
| KRH34622 | Soybean | cytosol | 27.07 | 42.42 |
| CDY70396 | Canola | mitochondrion | 24.31 | 42.11 |
| Zm00001d002143_P002 | Maize | cytosol | 48.9 | 40.32 |
| Os08t0176900-01 | Rice | nucleus | 42.54 | 39.59 |
| Zm00001d041428_P001 | Maize | cytosol | 16.57 | 38.46 |
| CDX95999 | Canola | nucleus | 46.13 | 37.78 |
| CDY38608 | Canola | nucleus | 46.13 | 37.78 |
| CDY22689 | Canola | nucleus | 41.99 | 35.51 |
| OQU79985 | Sorghum | golgi, vacuole | 50.55 | 35.47 |
| CDY70714 | Canola | nucleus | 33.98 | 34.94 |
| CDY70235 | Canola | nucleus | 33.7 | 33.52 |
| CDX70061 | Canola | nucleus | 41.71 | 33.48 |
| CDX98963 | Canola | nucleus | 41.44 | 33.26 |
| CDX95068 | Canola | nucleus | 42.82 | 32.43 |
| CDX93571 | Canola | nucleus | 42.54 | 32.22 |
| CDY06309 | Canola | nucleus | 42.82 | 32.02 |
| CDY00417 | Canola | mitochondrion | 19.89 | 31.03 |
| CDX79240 | Canola | nucleus | 48.07 | 30.53 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 33.43 | 28.61 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078D9M4 | EnsemblPlants:CDX85782 | ProteinID:CDX85782 |
| ProteinID:CDX85782.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00143541001 | InterPro:IPR004827 | InterPro:IPR025422 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF266 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI000058C618 | InterPro:bZIP |
Description
BnaA02g00310D
Coordinates
chrLK031842:+:1660410..1663324
Molecular Weight (calculated)
41617.5 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.538
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTTSTHFVP PRRFEIYETT LNQVSMWEES FKNNGGIFTP NSIIIPTDAK LDSLSEDTSH GTPHKFDQEA STSRHPDKTQ RRLAQNREAA RKSRLRKKAY
101: VQQLETSRLK LIHLEQELDR ARQQGFYEGN RVDTNALGFS DKMSSGIVAF EMEYGHWVEE QNRQISELRT VLQGQVSDVE LRLLVDNAMK HYFQLFRMKS
201: AAAKIDVFYI MSGMWKTSAE RFFMWIGGFR PSELLKVLLP HFDPLMDQQV LDVCNLRQSC QQAEDAVSQG MEKLQHTLAD SVAAGNLGEG SYIPQITCAM
301: ERLEALVSFV NQADHLRHET LQQMHRILTT RQAARGLLAL GEYFQRLRAL SSSWATRQRE PT
101: VQQLETSRLK LIHLEQELDR ARQQGFYEGN RVDTNALGFS DKMSSGIVAF EMEYGHWVEE QNRQISELRT VLQGQVSDVE LRLLVDNAMK HYFQLFRMKS
201: AAAKIDVFYI MSGMWKTSAE RFFMWIGGFR PSELLKVLLP HFDPLMDQQV LDVCNLRQSC QQAEDAVSQG MEKLQHTLAD SVAAGNLGEG SYIPQITCAM
301: ERLEALVSFV NQADHLRHET LQQMHRILTT RQAARGLLAL GEYFQRLRAL SSSWATRQRE PT
001: MNTTSTHFVP PRRFEVYEPL NQIGMWEESF KNNGDMYTPG SIIIPTNEKP DSLSEDTSHG TEGTPHKFDQ EASTSRHPDK IQRRLAQNRE AARKSRLRKK
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
Arabidopsis Description
TGA4At5g10030 [Source:UniProtKB/TrEMBL;Acc:Q24JJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.