Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37811 | Canola | nucleus | 99.19 | 99.19 |
| Bra031871.1-P | Field mustard | nucleus | 98.92 | 98.92 |
| CDY08810 | Canola | nucleus | 93.51 | 94.28 |
| CDY14552 | Canola | nucleus | 91.89 | 92.64 |
| AT5G65210.2 | Thale cress | nucleus | 90.81 | 91.3 |
| CDY18683 | Canola | cytosol | 90.0 | 89.52 |
| CDX81273 | Canola | nucleus | 91.89 | 87.4 |
| CDX85782 | Canola | nucleus | 82.43 | 84.25 |
| CDY40074 | Canola | nucleus | 81.62 | 83.43 |
| CDX69866 | Canola | nucleus | 80.81 | 82.14 |
| CDY21625 | Canola | nucleus | 78.65 | 79.95 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 69.46 | 73.64 |
| KRG97639 | Soybean | nucleus | 66.22 | 67.68 |
| KRH31239 | Soybean | nucleus | 65.68 | 66.76 |
| KRH43266 | Soybean | nucleus | 63.24 | 61.74 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 60.81 | 61.64 |
| KRH59415 | Soybean | nucleus | 61.08 | 61.08 |
| Solyc04g011670.2.1 | Tomato | nucleus | 61.35 | 60.7 |
| Zm00001d016312_P001 | Maize | cytosol | 15.14 | 60.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.76 | 59.32 |
| PGSC0003DMT400033308 | Potato | nucleus | 57.03 | 59.27 |
| Solyc04g054320.2.1 | Tomato | nucleus | 59.19 | 59.19 |
| GSMUA_Achr10P... | Banana | nucleus | 54.05 | 56.98 |
| CDY38843 | Canola | nucleus | 56.49 | 56.49 |
| CDY41495 | Canola | nucleus | 56.22 | 56.37 |
| CDY38253 | Canola | nucleus | 57.84 | 55.58 |
| CDX68037 | Canola | nucleus | 55.41 | 55.26 |
| PGSC0003DMT400016235 | Potato | nucleus | 57.03 | 53.83 |
| CDY21336 | Canola | nucleus | 58.11 | 51.44 |
| CDY14061 | Canola | nucleus | 44.86 | 50.92 |
| CDY05010 | Canola | nucleus | 44.86 | 50.92 |
| CDY08443 | Canola | nucleus | 45.14 | 50.45 |
| CDX73830 | Canola | nucleus | 45.14 | 50.45 |
| CDY00762 | Canola | nucleus | 44.86 | 50.15 |
| CDX98971 | Canola | nucleus | 44.32 | 50.0 |
| CDY50562 | Canola | nucleus | 45.14 | 50.0 |
| CDX70053 | Canola | nucleus | 44.05 | 49.85 |
| CDY52616 | Canola | nucleus | 44.59 | 49.55 |
| Os04t0637000-01 | Rice | nucleus | 52.97 | 49.37 |
| CDX88399 | Canola | nucleus | 55.95 | 48.14 |
| CDX87494 | Canola | nucleus | 56.76 | 47.3 |
| KXG27222 | Sorghum | nucleus | 51.89 | 47.06 |
| Zm00001d026398_P006 | Maize | nucleus | 51.35 | 46.12 |
| KXG38496 | Sorghum | nucleus | 38.65 | 45.98 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 50.54 | 44.63 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 52.43 | 44.6 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 51.08 | 44.47 |
| CDY42138 | Canola | nucleus | 38.11 | 43.52 |
| KRG92164 | Soybean | nucleus | 27.57 | 43.4 |
| Zm00001d024160_P003 | Maize | nucleus | 49.19 | 42.92 |
| KRH34622 | Soybean | cytosol | 26.49 | 42.42 |
| CDY70396 | Canola | mitochondrion | 23.24 | 41.15 |
| Os08t0176900-01 | Rice | nucleus | 42.97 | 40.87 |
| Zm00001d041428_P001 | Maize | cytosol | 17.03 | 40.38 |
| Zm00001d002143_P002 | Maize | cytosol | 47.57 | 40.09 |
| CDY71150 | Canola | nucleus, plastid | 21.35 | 39.9 |
| CDX95999 | Canola | nucleus | 43.51 | 36.43 |
| OQU79985 | Sorghum | golgi, vacuole | 50.54 | 36.24 |
| CDY38608 | Canola | nucleus | 43.24 | 36.2 |
| CDY22689 | Canola | nucleus | 40.81 | 35.28 |
| CDY70714 | Canola | nucleus | 32.16 | 33.81 |
| CDX70061 | Canola | nucleus | 39.73 | 32.59 |
| CDX95068 | Canola | nucleus | 41.89 | 32.43 |
| CDX98963 | Canola | nucleus | 39.46 | 32.37 |
| CDX93571 | Canola | nucleus | 41.62 | 32.22 |
| CDY06309 | Canola | nucleus | 41.89 | 32.02 |
| CDX79240 | Canola | nucleus | 49.19 | 31.93 |
| CDY70235 | Canola | nucleus | 31.35 | 31.87 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 34.32 | 30.02 |
| CDY00417 | Canola | mitochondrion | 18.38 | 29.31 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078H5Z1 | UniProt:A0A078H5Z1 | EnsemblPlants:CDY33975 |
| ProteinID:CDY33975 | ProteinID:CDY33975.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00055814001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF266 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE34E0 |
| InterPro:bZIP | : | : | : | : | : |
Description
BnaC02g43620DBnaC02g43620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5Z1]
Coordinates
chrLK032325:-:218206..220241
Molecular Weight (calculated)
42228.3 Da
IEP (calculated)
8.069
GRAVY (calculated)
-0.534
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTSTHFVP PRRVGIYEPL HQFGMWGETF KNNIGNGGDM NTPSHIIIPN NQKLDNNNLS EDTSHGTGGT PHMFDQEAST SRHPDKIQRR LAQNREAARK
101: SRLRKKAYVQ QLETSRLKLI HLEQELDRAR QQGFYVGNGI DTNSLSFSEP MNPGIAAFEM EYGHWIQEQN KQICELRTVL QGQVSDVELR LLVENGMKHY
201: FDLFRMKSAA AKADVFFVMS GMWRTSAERF FLWIGGFRPS DLLKVLLPHF DVMTDQQILD VCNLRQSCQQ AEDALSQGME KLQHTLADCV AGGRLGEGSY
301: IPQVNSAMER LEALVSFVNQ ADHLRHETLQ QMHRILTTRQ AARGLLALGE YFQRLRALSS SWATRHRELT
101: SRLRKKAYVQ QLETSRLKLI HLEQELDRAR QQGFYVGNGI DTNSLSFSEP MNPGIAAFEM EYGHWIQEQN KQICELRTVL QGQVSDVELR LLVENGMKHY
201: FDLFRMKSAA AKADVFFVMS GMWRTSAERF FLWIGGFRPS DLLKVLLPHF DVMTDQQILD VCNLRQSCQQ AEDALSQGME KLQHTLADCV AGGRLGEGSY
301: IPQVNSAMER LEALVSFVNQ ADHLRHETLQ QMHRILTTRQ AARGLLALGE YFQRLRALSS SWATRHRELT
001: MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
Arabidopsis Description
TGA1Transcription factor TGA1 [Source:UniProtKB/Swiss-Prot;Acc:Q39237]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.