Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009063.1-P | Field mustard | nucleus | 96.7 | 96.7 |
| CDX69866 | Canola | nucleus | 96.7 | 96.7 |
| CDY40074 | Canola | nucleus | 88.74 | 89.23 |
| CDX85782 | Canola | nucleus | 88.74 | 89.23 |
| AT5G10030.3 | Thale cress | nucleus | 87.09 | 87.09 |
| CDY08810 | Canola | nucleus | 79.4 | 78.75 |
| CDY33975 | Canola | nucleus | 79.95 | 78.65 |
| CDY37811 | Canola | nucleus | 79.4 | 78.11 |
| CDY14552 | Canola | nucleus | 78.02 | 77.38 |
| CDY18683 | Canola | cytosol | 75.55 | 73.92 |
| CDX81273 | Canola | nucleus | 77.47 | 72.49 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 67.03 | 69.91 |
| KRG97639 | Soybean | nucleus | 65.93 | 66.3 |
| KRH31239 | Soybean | nucleus | 65.38 | 65.38 |
| KRH59415 | Soybean | nucleus | 61.26 | 60.27 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 59.89 | 59.73 |
| KRH43266 | Soybean | nucleus | 61.81 | 59.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.04 | 57.63 |
| Solyc04g011670.2.1 | Tomato | nucleus | 58.79 | 57.22 |
| PGSC0003DMT400033308 | Potato | nucleus | 55.22 | 56.46 |
| Solyc04g054320.2.1 | Tomato | nucleus | 57.14 | 56.22 |
| Zm00001d016312_P001 | Maize | cytosol | 14.29 | 55.91 |
| GSMUA_Achr10P... | Banana | nucleus | 52.47 | 54.42 |
| CDY08443 | Canola | nucleus | 46.98 | 51.66 |
| PGSC0003DMT400016235 | Potato | nucleus | 55.49 | 51.53 |
| CDY38843 | Canola | nucleus | 51.92 | 51.08 |
| CDY41495 | Canola | nucleus | 51.37 | 50.68 |
| CDX98971 | Canola | nucleus | 45.6 | 50.61 |
| CDX70053 | Canola | nucleus | 45.33 | 50.46 |
| CDY50562 | Canola | nucleus | 46.15 | 50.3 |
| CDY38253 | Canola | nucleus | 52.75 | 49.87 |
| CDX68037 | Canola | nucleus | 50.82 | 49.87 |
| CDY52616 | Canola | nucleus | 45.6 | 49.85 |
| CDY14061 | Canola | nucleus | 44.51 | 49.69 |
| CDY05010 | Canola | nucleus | 44.51 | 49.69 |
| CDX73830 | Canola | nucleus | 45.05 | 49.55 |
| CDY00762 | Canola | nucleus | 44.78 | 49.24 |
| Os04t0637000-01 | Rice | nucleus | 53.02 | 48.61 |
| CDY21336 | Canola | nucleus | 53.02 | 46.17 |
| KXG27222 | Sorghum | nucleus | 51.37 | 45.83 |
| Zm00001d026398_P006 | Maize | nucleus | 51.1 | 45.15 |
| CDY42138 | Canola | nucleus | 39.84 | 44.75 |
| KRG92164 | Soybean | nucleus | 28.3 | 43.83 |
| CDX88399 | Canola | nucleus | 51.37 | 43.49 |
| CDX87494 | Canola | nucleus | 52.2 | 42.79 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 48.9 | 42.48 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 49.45 | 42.35 |
| KXG38496 | Sorghum | nucleus | 35.99 | 42.12 |
| KRH34622 | Soybean | cytosol | 26.65 | 41.99 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 50.0 | 41.84 |
| CDY71150 | Canola | nucleus, plastid | 22.53 | 41.41 |
| Zm00001d024160_P003 | Maize | nucleus | 46.43 | 39.86 |
| CDY70396 | Canola | mitochondrion | 22.8 | 39.71 |
| Os08t0176900-01 | Rice | nucleus | 42.03 | 39.33 |
| Zm00001d002143_P002 | Maize | cytosol | 47.25 | 39.18 |
| Zm00001d041428_P001 | Maize | cytosol | 16.48 | 38.46 |
| CDX95999 | Canola | nucleus | 43.96 | 36.2 |
| CDY38608 | Canola | nucleus | 43.96 | 36.2 |
| OQU79985 | Sorghum | golgi, vacuole | 48.08 | 33.91 |
| CDY22689 | Canola | nucleus | 39.29 | 33.41 |
| CDY70714 | Canola | nucleus | 32.14 | 33.24 |
| CDX70061 | Canola | nucleus | 40.11 | 32.37 |
| CDX98963 | Canola | nucleus | 39.84 | 32.15 |
| CDY70235 | Canola | nucleus | 32.14 | 32.14 |
| CDX95068 | Canola | nucleus | 40.38 | 30.75 |
| CDX93571 | Canola | nucleus | 40.11 | 30.54 |
| CDY06309 | Canola | nucleus | 40.11 | 30.17 |
| CDY00417 | Canola | mitochondrion | 18.68 | 29.31 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 32.97 | 28.37 |
| CDX79240 | Canola | nucleus | 44.23 | 28.25 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078G590 | UniProt:A0A078G590 | EnsemblPlants:CDY21625 |
| ProteinID:CDY21625 | ProteinID:CDY21625.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00016097001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF180 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE5DCF |
| InterPro:bZIP | : | : | : | : | : |
Description
BnaC09g46670DBnaC09g46670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G590]
Coordinates
chrLK032122:-:540788..543506
Molecular Weight (calculated)
41807.7 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.527
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTTTSSHFV PPTRFEIFDP LNQISTMWEE SFKNNGGGFY TPNSIIIPTN QKPYSLSEDG TEGTPHKFDQ EASTSRHPDK TQRRLAQNRE AAKKSRLRKK
101: AYVQQLETSR LKLIRLEQEL DRARQQGFYA SKRVDTNALS FSDNMCSGIV AFEMEYGHWV EEQNMQIHEL RTVLNGQVSD VEIRLLVDNA MKHYFQLFLM
201: KSAAAKLDVF YIMSGMWKTS AERFFLWIGG FRPSELLKVL VPHFDPMMDQ QVLDVCNLRQ SCQQAEDAVS QGMEKLQHTL AESVAAGELG EGSYVPQITS
301: AMERLEALVS FVDQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWETRQ REPT
101: AYVQQLETSR LKLIRLEQEL DRARQQGFYA SKRVDTNALS FSDNMCSGIV AFEMEYGHWV EEQNMQIHEL RTVLNGQVSD VEIRLLVDNA MKHYFQLFLM
201: KSAAAKLDVF YIMSGMWKTS AERFFLWIGG FRPSELLKVL VPHFDPMMDQ QVLDVCNLRQ SCQQAEDAVS QGMEKLQHTL AESVAAGELG EGSYVPQITS
301: AMERLEALVS FVDQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWETRQ REPT
001: MNTTSTHFVP PRRFEVYEPL NQIGMWEESF KNNGDMYTPG SIIIPTNEKP DSLSEDTSHG TEGTPHKFDQ EASTSRHPDK IQRRLAQNRE AARKSRLRKK
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
Arabidopsis Description
TGA4At5g10030 [Source:UniProtKB/TrEMBL;Acc:Q24JJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.