Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024366.1-P | Field mustard | nucleus | 97.55 | 97.55 |
| CDY08810 | Canola | nucleus | 97.55 | 97.55 |
| CDY33975 | Canola | nucleus | 92.64 | 91.89 |
| CDY37811 | Canola | nucleus | 92.1 | 91.35 |
| AT5G65210.2 | Thale cress | nucleus | 91.55 | 91.3 |
| CDY18683 | Canola | cytosol | 88.56 | 87.37 |
| CDX81273 | Canola | nucleus | 90.46 | 85.35 |
| CDX85782 | Canola | nucleus | 80.38 | 81.49 |
| CDY40074 | Canola | nucleus | 79.56 | 80.66 |
| CDX69866 | Canola | nucleus | 79.56 | 80.22 |
| CDY21625 | Canola | nucleus | 77.38 | 78.02 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 68.94 | 72.49 |
| KRG97639 | Soybean | nucleus | 66.48 | 67.4 |
| KRH31239 | Soybean | nucleus | 65.94 | 66.48 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 62.13 | 62.47 |
| Solyc04g011670.2.1 | Tomato | nucleus | 62.13 | 60.96 |
| KRH43266 | Soybean | nucleus | 62.67 | 60.69 |
| KRH59415 | Soybean | nucleus | 61.04 | 60.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.77 | 59.89 |
| PGSC0003DMT400033308 | Potato | nucleus | 57.49 | 59.27 |
| Solyc04g054320.2.1 | Tomato | nucleus | 59.67 | 59.19 |
| GSMUA_Achr10P... | Banana | nucleus | 55.04 | 57.55 |
| Zm00001d016312_P001 | Maize | cytosol | 14.44 | 56.99 |
| CDY38843 | Canola | nucleus | 56.4 | 55.95 |
| CDY41495 | Canola | nucleus | 56.13 | 55.83 |
| CDY38253 | Canola | nucleus | 57.22 | 54.55 |
| CDX68037 | Canola | nucleus | 55.04 | 54.45 |
| PGSC0003DMT400016235 | Potato | nucleus | 57.77 | 54.08 |
| CDY05010 | Canola | nucleus | 46.05 | 51.84 |
| CDY14061 | Canola | nucleus | 46.05 | 51.84 |
| CDY08443 | Canola | nucleus | 46.32 | 51.36 |
| CDY21336 | Canola | nucleus | 57.49 | 50.48 |
| CDY50562 | Canola | nucleus | 45.78 | 50.3 |
| CDX98971 | Canola | nucleus | 44.69 | 50.0 |
| CDY52616 | Canola | nucleus | 45.23 | 49.85 |
| CDX73830 | Canola | nucleus | 44.96 | 49.85 |
| CDX70053 | Canola | nucleus | 44.41 | 49.85 |
| CDY00762 | Canola | nucleus | 44.69 | 49.55 |
| CDX88399 | Canola | nucleus | 57.49 | 49.07 |
| Os04t0637000-01 | Rice | nucleus | 52.32 | 48.36 |
| CDX87494 | Canola | nucleus | 58.31 | 48.2 |
| KXG27222 | Sorghum | nucleus | 51.5 | 46.32 |
| KXG38496 | Sorghum | nucleus | 39.24 | 46.3 |
| Zm00001d026398_P006 | Maize | nucleus | 51.23 | 45.63 |
| CDY42138 | Canola | nucleus | 39.51 | 44.75 |
| KRG92164 | Soybean | nucleus | 28.34 | 44.26 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 50.41 | 44.15 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 52.32 | 44.14 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 50.95 | 44.0 |
| KRH34622 | Soybean | cytosol | 27.52 | 43.72 |
| Zm00001d024160_P003 | Maize | nucleus | 49.59 | 42.92 |
| CDY70396 | Canola | mitochondrion | 23.71 | 41.63 |
| CDY71150 | Canola | nucleus, plastid | 22.07 | 40.91 |
| Os08t0176900-01 | Rice | nucleus | 42.78 | 40.36 |
| Zm00001d002143_P002 | Maize | cytosol | 46.87 | 39.18 |
| Zm00001d041428_P001 | Maize | cytosol | 16.62 | 39.1 |
| CDX95999 | Canola | nucleus | 44.69 | 37.1 |
| CDY38608 | Canola | nucleus | 44.41 | 36.88 |
| OQU79985 | Sorghum | golgi, vacuole | 50.95 | 36.24 |
| CDY22689 | Canola | nucleus | 40.87 | 35.05 |
| CDY70714 | Canola | nucleus | 31.88 | 33.24 |
| CDX95068 | Canola | nucleus | 41.96 | 32.22 |
| CDX70061 | Canola | nucleus | 39.51 | 32.15 |
| CDX93571 | Canola | nucleus | 41.69 | 32.01 |
| CDX79240 | Canola | nucleus | 49.59 | 31.93 |
| CDX98963 | Canola | nucleus | 39.24 | 31.93 |
| CDY06309 | Canola | nucleus | 41.96 | 31.82 |
| CDY70235 | Canola | nucleus | 31.34 | 31.59 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 34.06 | 29.55 |
| CDY00417 | Canola | mitochondrion | 17.98 | 28.45 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078FNW7 | UniProt:A0A078FNW7 | EnsemblPlants:CDY14552 |
| ProteinID:CDY14552 | ProteinID:CDY14552.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00079287001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF266 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE68DA |
| InterPro:bZIP | : | : | : | : | : |
Description
BnaC03g49070DBnaC03g49070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNW7]
Coordinates
chrLK032044:+:520406..523847
Molecular Weight (calculated)
42015.1 Da
IEP (calculated)
8.360
GRAVY (calculated)
-0.555
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTSTHFVP PSRVGIYEPL HQFGMWGETF KSNIGNGGSM NTPNHILIPN NQKLDNNNLS EDTSHGTPHM FDQEASTSRH PDKIQRRLAQ NREAARKSRL
101: RKKAYVQQLE TSRLKLIQLE QELDRARQQG FYVGNGIDTS SLTLSETMNP GIATFEMKYG HWIEEQNRQI CELRTVLHGH VTDVELRSLV ENTMKHYFEL
201: FRMKSAAAKA DVFFVMSGMW RTSAERFFLW IGGFRPSDLL KVLLPHFDVM TDQQVLDVCN LRQSCQQAED ALSQGMEKLQ HTLAECVARG GLGEGNYIPQ
301: VNSAMERLEA LVSFVNQADH LRHETLQQMH RILTTRQAAR GLMALGEYFQ RLRALSSSWA TRHREPT
101: RKKAYVQQLE TSRLKLIQLE QELDRARQQG FYVGNGIDTS SLTLSETMNP GIATFEMKYG HWIEEQNRQI CELRTVLHGH VTDVELRSLV ENTMKHYFEL
201: FRMKSAAAKA DVFFVMSGMW RTSAERFFLW IGGFRPSDLL KVLLPHFDVM TDQQVLDVCN LRQSCQQAED ALSQGMEKLQ HTLAECVARG GLGEGNYIPQ
301: VNSAMERLEA LVSFVNQADH LRHETLQQMH RILTTRQAAR GLMALGEYFQ RLRALSSSWA TRHREPT
001: MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
Arabidopsis Description
TGA1Transcription factor TGA1 [Source:UniProtKB/Swiss-Prot;Acc:Q39237]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.