Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43266 | Soybean | nucleus | 94.05 | 91.82 |
| KRG97639 | Soybean | nucleus | 73.24 | 74.86 |
| KRH31239 | Soybean | nucleus | 71.89 | 73.08 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 65.41 | 69.34 |
| AT5G10030.3 | Thale cress | nucleus | 64.05 | 65.11 |
| AT5G65210.2 | Thale cress | nucleus | 63.78 | 64.13 |
| Bra028604.1-P | Field mustard | nucleus | 62.7 | 64.09 |
| CDX85782 | Canola | nucleus | 62.7 | 64.09 |
| CDY40074 | Canola | nucleus | 62.43 | 63.81 |
| Bra024366.1-P | Field mustard | nucleus | 61.62 | 62.13 |
| CDY08810 | Canola | nucleus | 61.62 | 62.13 |
| CDX69866 | Canola | nucleus | 61.08 | 62.09 |
| Bra009063.1-P | Field mustard | nucleus | 61.08 | 62.09 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 61.08 | 61.92 |
| CDY21625 | Canola | nucleus | 60.27 | 61.26 |
| CDY33975 | Canola | nucleus | 61.08 | 61.08 |
| CDY14552 | Canola | nucleus | 60.54 | 61.04 |
| Bra031871.1-P | Field mustard | nucleus | 60.81 | 60.81 |
| CDY37811 | Canola | nucleus | 60.81 | 60.81 |
| CDY18683 | Canola | cytosol | 59.73 | 59.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.68 | 58.19 |
| PGSC0003DMT400033308 | Potato | nucleus | 55.95 | 58.15 |
| CDX81273 | Canola | nucleus | 61.08 | 58.1 |
| Solyc04g054320.2.1 | Tomato | nucleus | 57.57 | 57.57 |
| Solyc04g011670.2.1 | Tomato | nucleus | 58.11 | 57.49 |
| GSMUA_Achr10P... | Banana | nucleus | 54.32 | 57.27 |
| Bra037809.1-P | Field mustard | nucleus | 58.38 | 55.1 |
| KRH63045 | Soybean | cytosol | 13.51 | 53.19 |
| KRH36324 | Soybean | nucleus | 47.57 | 53.01 |
| Zm00001d016312_P001 | Maize | cytosol | 12.97 | 51.61 |
| KRH66777 | Soybean | nucleus | 40.27 | 51.38 |
| PGSC0003DMT400016235 | Potato | nucleus | 53.24 | 50.26 |
| KRH53141 | Soybean | nucleus | 48.11 | 50.14 |
| KRH64780 | Soybean | nucleus | 48.38 | 49.45 |
| KRH16629 | Soybean | nucleus | 49.19 | 49.19 |
| KRH18838 | Soybean | nucleus | 48.92 | 48.92 |
| KRG92164 | Soybean | nucleus | 29.46 | 46.38 |
| Os04t0637000-01 | Rice | nucleus | 49.73 | 46.35 |
| KRH34622 | Soybean | cytosol | 28.11 | 45.02 |
| KXG27222 | Sorghum | nucleus | 49.46 | 44.85 |
| Zm00001d026398_P006 | Maize | nucleus | 48.11 | 43.2 |
| KXG38496 | Sorghum | nucleus | 36.22 | 43.09 |
| Bra037374.1-P | Field mustard | nucleus | 36.49 | 42.99 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 47.57 | 42.0 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 47.84 | 41.65 |
| KRG93068 | Soybean | nucleus | 49.46 | 41.22 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 48.38 | 41.15 |
| Zm00001d024160_P003 | Maize | nucleus | 46.49 | 40.57 |
| KRH20680 | Soybean | nucleus | 49.73 | 39.23 |
| KRG95103 | Soybean | nucleus | 48.65 | 39.22 |
| KRH66771 | Soybean | nucleus | 47.84 | 38.48 |
| Zm00001d041428_P001 | Maize | cytosol | 15.95 | 37.82 |
| Zm00001d002143_P002 | Maize | cytosol | 44.86 | 37.81 |
| Os08t0176900-01 | Rice | nucleus | 39.46 | 37.53 |
| KRG90784 | Soybean | nucleus | 44.32 | 36.04 |
| KRH21813 | Soybean | nucleus | 15.68 | 36.02 |
| KRH13334 | Soybean | nucleus | 48.38 | 36.02 |
| KRH35977 | Soybean | nucleus | 44.32 | 35.96 |
| KRH70569 | Soybean | nucleus | 44.05 | 34.9 |
| OQU79985 | Sorghum | golgi, vacuole | 47.84 | 34.3 |
| KRH75411 | Soybean | nucleus | 44.59 | 33.95 |
| KRH26635 | Soybean | nucleus | 43.51 | 32.99 |
| KRH67029 | Soybean | nucleus | 43.24 | 32.59 |
| KRH22685 | Soybean | nucleus | 42.97 | 32.45 |
| KRH71904 | Soybean | nucleus | 42.43 | 32.44 |
| KRG95350 | Soybean | nucleus | 42.7 | 32.18 |
| KRH30432 | Soybean | nucleus | 42.43 | 31.85 |
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 15.14 | 31.46 |
| KRH25227 | Soybean | nucleus | 42.43 | 31.34 |
| KRH32997 | Soybean | nucleus | 42.43 | 30.37 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 30.54 | 26.71 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100808443 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | EMBL:ACUP02003323 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_05G182500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | InterPro:IPR025422 | UniProt:K7KR05 | EnsemblPlants:KRH59415 |
| ProteinID:KRH59415 | ProteinID:KRH59415.1 | ProteinID:KRH59416.1 | ProteinID:KRH59417.1 | ProteinID:KRH59418.1 | ProteinID:KRH59419.1 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF180 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI000294B1E0 | InterPro:bZIP |
Description
hypothetical protein
Coordinates
chr5:+:37029299..37037313
Molecular Weight (calculated)
42099.3 Da
IEP (calculated)
7.723
GRAVY (calculated)
-0.468
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATSSPFVS SRRMGVYDPI HQISTWEENF KSNDTNNLTV STSIIGEVDM KLDNQFQVQS EDDTHGIFGT SVKYDQDTNR LTDKTQRRLA QNREAARKSR
101: LRKKAYVQQL ESCRLKLLQL EQEVDHAKQQ GLYIGNGLGS NNLGFAGSVN SGITLFKMEY GNWVEEQNRQ ILELRTALSS HIGDIQLGTL VQGIMNHYTK
201: LFGMKSAAAK ADVFYVMSGM WKTTAERFFL WIGGFRPSEL LKVLVPLSEP LTEQQRFDAY GLEKSCQQAE DALSQGMEKL QQMLSDSVGP GQLVEGTHIP
301: QMDTAMERLE ALVSFVNQAD HLRQETLRQM YRILTIRQTG RFLLALGEYF QRLRALSKLW INRPQFPGHA
101: LRKKAYVQQL ESCRLKLLQL EQEVDHAKQQ GLYIGNGLGS NNLGFAGSVN SGITLFKMEY GNWVEEQNRQ ILELRTALSS HIGDIQLGTL VQGIMNHYTK
201: LFGMKSAAAK ADVFYVMSGM WKTTAERFFL WIGGFRPSEL LKVLVPLSEP LTEQQRFDAY GLEKSCQQAE DALSQGMEKL QQMLSDSVGP GQLVEGTHIP
301: QMDTAMERLE ALVSFVNQAD HLRQETLRQM YRILTIRQTG RFLLALGEYF QRLRALSKLW INRPQFPGHA
001: MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
Arabidopsis Description
TGA1Transcription factor TGA1 [Source:UniProtKB/Swiss-Prot;Acc:Q39237]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.