Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66771 | Soybean | nucleus | 96.73 | 96.52 |
| KRH66777 | Soybean | nucleus | 51.85 | 82.07 |
| KRH36324 | Soybean | nucleus | 59.04 | 81.63 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 58.17 | 80.42 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 58.17 | 80.42 |
| Os01t0279900-01 | Rice | nucleus | 56.86 | 79.33 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 25.71 | 79.19 |
| EES02530 | Sorghum | nucleus | 56.64 | 78.79 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 56.43 | 78.01 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 56.43 | 78.01 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 56.43 | 78.01 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 55.99 | 77.64 |
| VIT_08s0007g05170.t01 | Wine grape | nucleus | 76.03 | 77.38 |
| KXG39494 | Sorghum | nucleus | 56.43 | 77.31 |
| Os03t0318600-01 | Rice | nucleus | 55.77 | 76.88 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 55.56 | 76.12 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 55.56 | 76.12 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 55.34 | 76.05 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 55.34 | 76.05 |
| KXG36997 | Sorghum | nucleus | 54.9 | 75.68 |
| Zm00001d022542_P002 | Maize | nucleus | 54.47 | 75.08 |
| Os07t0687700-01 | Rice | nucleus | 53.81 | 73.95 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 54.03 | 73.81 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 54.03 | 73.81 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 54.03 | 73.81 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 52.07 | 70.92 |
| GSMUA_Achr10P... | Banana | nucleus | 68.63 | 68.93 |
| KRG93068 | Soybean | nucleus | 66.01 | 68.24 |
| PGSC0003DMT400060926 | Potato | nucleus | 64.27 | 68.13 |
| KXG22247 | Sorghum | nucleus | 49.02 | 67.77 |
| Solyc10g080770.1.1 | Tomato | nucleus | 65.58 | 66.89 |
| KRH20680 | Soybean | nucleus | 67.97 | 66.52 |
| EES03778 | Sorghum | nucleus | 67.32 | 66.03 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 67.97 | 65.68 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 68.19 | 65.62 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 68.19 | 65.62 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 68.19 | 65.62 |
| PGSC0003DMT400060922 | Potato | nucleus | 37.47 | 64.18 |
| Zm00001d008225_P001 | Maize | nucleus | 58.61 | 64.05 |
| GSMUA_Achr11P... | Banana | nucleus | 66.67 | 64.02 |
| Solyc10g080780.1.1 | Tomato | cytosol | 37.25 | 63.57 |
| Os05t0492000-00 | Rice | nucleus | 44.44 | 61.82 |
| Zm00001d043153_P001 | Maize | nucleus | 55.77 | 60.66 |
| KRH13334 | Soybean | nucleus | 65.36 | 60.36 |
| Zm00001d028936_P001 | Maize | nucleus | 51.42 | 60.36 |
| Zm00001d010658_P001 | Maize | nucleus | 45.32 | 60.29 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 43.79 | 60.0 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 43.57 | 58.82 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 43.14 | 58.41 |
| Zm00001d012553_P003 | Maize | nucleus | 59.7 | 58.3 |
| KRH35977 | Soybean | nucleus | 55.34 | 55.7 |
| Os01t0808100-01 | Rice | nucleus | 43.57 | 54.95 |
| KRG90784 | Soybean | nucleus | 54.25 | 54.73 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 40.09 | 53.64 |
| KRH70569 | Soybean | nucleus | 54.47 | 53.53 |
| KRG97639 | Soybean | nucleus | 42.05 | 53.31 |
| KRH31239 | Soybean | nucleus | 41.39 | 52.2 |
| KRH75411 | Soybean | nucleus | 54.25 | 51.23 |
| KRH21813 | Soybean | nucleus | 17.86 | 50.93 |
| KRH59415 | Soybean | nucleus | 39.22 | 48.65 |
| KRH63045 | Soybean | cytosol | 9.8 | 47.87 |
| KRH43266 | Soybean | nucleus | 39.0 | 47.23 |
| KRH53141 | Soybean | nucleus | 35.51 | 45.92 |
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 17.65 | 45.51 |
| KRH64780 | Soybean | nucleus | 35.29 | 44.75 |
| KRH18838 | Soybean | nucleus | 34.86 | 43.24 |
| KRH16629 | Soybean | nucleus | 34.64 | 42.97 |
| KRH67029 | Soybean | nucleus | 44.66 | 41.75 |
| KRG95350 | Soybean | nucleus | 44.44 | 41.55 |
| KRH71904 | Soybean | nucleus | 43.14 | 40.91 |
| KRH26635 | Soybean | nucleus | 42.92 | 40.37 |
| KRH22685 | Soybean | nucleus | 42.7 | 40.0 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 30.5 | 39.89 |
| KRG92164 | Soybean | nucleus | 20.26 | 39.57 |
| KRH30432 | Soybean | nucleus | 42.27 | 39.35 |
| KRH25227 | Soybean | nucleus | 42.7 | 39.12 |
| KRH34622 | Soybean | cytosol | 19.17 | 38.1 |
| KRH32997 | Soybean | nucleus | 42.7 | 37.91 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | EntrezGene:778136 | EMBL:ACUP02012078 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_19G130200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1N8S2 | InterPro:IPR004827 | InterPro:IPR025422 |
| ProteinID:KRG95101.1 | ProteinID:KRG95102.1 | EnsemblPlants:KRG95103 | ProteinID:KRG95103 | ProteinID:KRG95103.1 | PFAM:PF07716 |
| PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 |
| SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI00023DD5E4 | InterPro:bZIP | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:38988741..38995145
Molecular Weight (calculated)
50720.8 Da
IEP (calculated)
8.920
GRAVY (calculated)
-0.574
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRSRTVNV NTKDTNKVLN GMPSYAPPLP SSNSIAMEAT NVHPSRISEF GTLEQSLGFR VEDTINLSRN PMFNQMKSNS QALGADIQFG ALNKSIATSD
101: INLSAAIAGS QALVLQKDSQ PTLASTSAGR ENWGETNLAD ASPRTDTSTD DTEDKNQRPE RGESSGSKDK SDQKTLRRLA QNREAARKSR LRKKAYVQQL
201: ESSRLKLTQL EQELQRARQQ GIFISSTGDQ AQSMSGNGAM AFDVEYARWL EEHNRQTNEL RAAINSHAGD IELRTIVDNF MTQFDDIFRL KGIAAKADVF
301: HILSGMWKTP AERCFMWIGG FRSSELLKLL ESQLEPLTEQ QLMGIYNLQQ SSQQAEDALS QGMDALQQSL SETLANGSPS TSGSSGNVAS YMGQMAMAMG
401: KLGTLDGFLR QADNLRQQTL QQMLRILTTR QSARALLAIS DYFSRLRALS SLWLARPRE
101: INLSAAIAGS QALVLQKDSQ PTLASTSAGR ENWGETNLAD ASPRTDTSTD DTEDKNQRPE RGESSGSKDK SDQKTLRRLA QNREAARKSR LRKKAYVQQL
201: ESSRLKLTQL EQELQRARQQ GIFISSTGDQ AQSMSGNGAM AFDVEYARWL EEHNRQTNEL RAAINSHAGD IELRTIVDNF MTQFDDIFRL KGIAAKADVF
301: HILSGMWKTP AERCFMWIGG FRSSELLKLL ESQLEPLTEQ QLMGIYNLQQ SSQQAEDALS QGMDALQQSL SETLANGSPS TSGSSGNVAS YMGQMAMAMG
401: KLGTLDGFLR QADNLRQQTL QQMLRILTTR QSARALLAIS DYFSRLRALS SLWLARPRE
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.