CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21813	Soybean	nucleus	70.79	78.26
HORVU2Hr1G116130.4	Barley	nucleus	25.84	34.59
KRH36324	Soybean	nucleus	35.96	19.28
KRG95103	Soybean	nucleus	45.51	17.65
KRH66771	Soybean	nucleus	44.94	17.39
KRG93068	Soybean	nucleus	42.7	17.12
KRH20680	Soybean	nucleus	44.38	16.84
KRG97639	Soybean	nucleus	32.02	15.75
KRH31239	Soybean	nucleus	32.02	15.66
KRH70569	Soybean	nucleus	39.89	15.2
KRH59415	Soybean	nucleus	31.46	15.14
KRH13334	Soybean	nucleus	42.13	15.09
KRH71904	Soybean	nucleus	40.45	14.88
KRH43266	Soybean	nucleus	31.46	14.78
KRH64780	Soybean	nucleus	29.78	14.64
KRH75411	Soybean	nucleus	39.89	14.61
KRH26635	Soybean	nucleus	39.89	14.55
KRH66777	Soybean	nucleus	23.6	14.48
KRH67029	Soybean	nucleus	39.89	14.46
KRG95350	Soybean	nucleus	39.89	14.46
KRH53141	Soybean	nucleus	28.65	14.37
KRH22685	Soybean	nucleus	39.33	14.29
KRH35977	Soybean	nucleus	36.52	14.25
KRH30432	Soybean	nucleus	39.33	14.2
KRG90784	Soybean	nucleus	35.96	14.07
KRH18838	Soybean	nucleus	29.21	14.05
KRH16629	Soybean	nucleus	28.65	13.78
KRH25227	Soybean	nucleus	38.76	13.77
KRH32997	Soybean	nucleus	39.33	13.54
Zm00001d045823_P001	Maize	cytosol	15.17	8.94
Os01t0859600-01	Rice	cytosol	16.29	6.95
KRG92164	Soybean	nucleus	6.74	5.11
KRH34622	Soybean	cytosol	6.18	4.76
KRH63045	Soybean	cytosol	1.69	3.19

Protein Annotations

MapMan:15.5.4.1	Gene3D:3.40.640.10	UniProt:A0A0R0IG25	EMBL:ACUP02005924	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G184300
GO:GO:0003674	GO:GO:0003700	GO:GO:0003824	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:IPR015421	EnsemblPlants:KRH39187
ProteinID:KRH39187	ProteinID:KRH39187.1	PFAM:PF00170	PFAM:PF00464	ScanProsite:PS00036	PANTHER:PTHR22952
PANTHER:PTHR22952:SF255	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	SMART:SM00338	SUPFAM:SSF53383	SUPFAM:SSF57959
UniParc:UPI00023CF1A0	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:40950879..40953576

Molecular Weight (calculated)

20799.0 Da

IEP (calculated)

9.752

GRAVY (calculated)

-0.502

Length

178 amino acids

Sequence
(BLAST)

001: MIGYAFSFFL TCCRDFGFRA MEATNVHPPR ISEFGTLDQS LGFRIEDTNC LNLSYIQKHA YFYSKIWCFI VFWQPERCES SGSKDKSNQK TLRRLAQNCE
101: AARKSRLRKK AYQQQLESSR FKLTQLEQEL QRARQQVLYD YKDKINQPVF PGLQGGPYNH TIIGLAVALK QVCRRISC

Best Arabidopsis Sequence Match ( AT3G12250.1 )
(BLAST)

001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE

Arabidopsis Description

TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.