Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95103 | Soybean | nucleus | 96.52 | 96.73 |
| KRH66777 | Soybean | nucleus | 52.39 | 83.1 |
| KRH36324 | Soybean | nucleus | 59.13 | 81.93 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 57.83 | 80.12 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 57.83 | 80.12 |
| Os01t0279900-01 | Rice | nucleus | 56.74 | 79.33 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 25.65 | 79.19 |
| EES02530 | Sorghum | nucleus | 56.52 | 78.79 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 56.3 | 78.01 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 56.3 | 78.01 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 56.3 | 78.01 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 55.87 | 77.64 |
| KXG39494 | Sorghum | nucleus | 56.09 | 77.01 |
| VIT_08s0007g05170.t01 | Wine grape | nucleus | 75.43 | 76.94 |
| Os03t0318600-01 | Rice | nucleus | 55.43 | 76.58 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 55.22 | 75.82 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 55.22 | 75.82 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 55.0 | 75.75 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 55.0 | 75.75 |
| KXG36997 | Sorghum | nucleus | 54.57 | 75.38 |
| Zm00001d022542_P002 | Maize | nucleus | 54.13 | 74.77 |
| Os07t0687700-01 | Rice | nucleus | 53.91 | 74.25 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 53.91 | 73.81 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 53.91 | 73.81 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 53.91 | 73.81 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 51.74 | 70.62 |
| GSMUA_Achr10P... | Banana | nucleus | 68.91 | 69.37 |
| KRG93068 | Soybean | nucleus | 65.87 | 68.24 |
| KXG22247 | Sorghum | nucleus | 48.7 | 67.47 |
| PGSC0003DMT400060926 | Potato | nucleus | 63.48 | 67.44 |
| Solyc10g080770.1.1 | Tomato | nucleus | 64.78 | 66.22 |
| KRH20680 | Soybean | nucleus | 67.39 | 66.1 |
| EES03778 | Sorghum | nucleus | 66.96 | 65.81 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 67.17 | 65.05 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 67.39 | 64.99 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 67.39 | 64.99 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 67.39 | 64.99 |
| PGSC0003DMT400060922 | Potato | nucleus | 37.83 | 64.93 |
| Zm00001d008225_P001 | Maize | nucleus | 58.48 | 64.05 |
| GSMUA_Achr11P... | Banana | nucleus | 66.3 | 63.81 |
| Solyc10g080780.1.1 | Tomato | cytosol | 36.96 | 63.2 |
| Os05t0492000-00 | Rice | nucleus | 44.13 | 61.52 |
| Zm00001d043153_P001 | Maize | nucleus | 55.65 | 60.66 |
| KRH13334 | Soybean | nucleus | 65.22 | 60.36 |
| Zm00001d010658_P001 | Maize | nucleus | 45.22 | 60.29 |
| Zm00001d028936_P001 | Maize | nucleus | 51.09 | 60.1 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 43.26 | 59.4 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 43.04 | 58.24 |
| Zm00001d012553_P003 | Maize | nucleus | 59.35 | 58.09 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 42.61 | 57.82 |
| KRH35977 | Soybean | nucleus | 55.0 | 55.48 |
| KRG90784 | Soybean | nucleus | 53.91 | 54.51 |
| Os01t0808100-01 | Rice | nucleus | 43.04 | 54.4 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 39.57 | 53.06 |
| KRH70569 | Soybean | nucleus | 53.7 | 52.89 |
| KRG97639 | Soybean | nucleus | 41.3 | 52.49 |
| KRH31239 | Soybean | nucleus | 40.65 | 51.37 |
| KRH75411 | Soybean | nucleus | 53.48 | 50.62 |
| KRH21813 | Soybean | nucleus | 17.61 | 50.31 |
| KRH59415 | Soybean | nucleus | 38.48 | 47.84 |
| KRH63045 | Soybean | cytosol | 9.57 | 46.81 |
| KRH43266 | Soybean | nucleus | 38.26 | 46.44 |
| KRH53141 | Soybean | nucleus | 35.0 | 45.35 |
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 17.39 | 44.94 |
| KRH64780 | Soybean | nucleus | 34.78 | 44.2 |
| KRH18838 | Soybean | nucleus | 34.35 | 42.7 |
| KRH16629 | Soybean | nucleus | 34.13 | 42.43 |
| KRH67029 | Soybean | nucleus | 44.35 | 41.55 |
| KRG95350 | Soybean | nucleus | 44.13 | 41.34 |
| KRH71904 | Soybean | nucleus | 43.04 | 40.91 |
| KRH26635 | Soybean | nucleus | 42.83 | 40.37 |
| KRG92164 | Soybean | nucleus | 20.43 | 40.0 |
| KRH22685 | Soybean | nucleus | 42.61 | 40.0 |
| KRH30432 | Soybean | nucleus | 42.83 | 39.96 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 30.22 | 39.6 |
| KRH25227 | Soybean | nucleus | 42.61 | 39.12 |
| KRH34622 | Soybean | cytosol | 19.35 | 38.53 |
| KRH32997 | Soybean | nucleus | 43.04 | 38.3 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100780071 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | EMBL:ACUP02002009 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_03G127600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1JN50 | InterPro:IPR004827 | InterPro:IPR025422 |
| ProteinID:KRH66770.1 | EnsemblPlants:KRH66771 | ProteinID:KRH66771 | ProteinID:KRH66771.1 | PFAM:PF00170 | PFAM:PF14144 |
| ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 |
| SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI00023C1C3A | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:34171561..34177836
Molecular Weight (calculated)
50930.9 Da
IEP (calculated)
7.716
GRAVY (calculated)
-0.586
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRSRTVNV NTKDTDKVLN GMPSYAPPLP SSSNSMAMEA TNAHPSRISE FGTLEQSLGF RVEDTINLSR NPMFNQMKSN SQALGADIQF GALNKSIATS
101: DINLSAAIAA SQALVFQKDS QPTLASTSAG RENWGETNMA DASPRTDTST DDTEDKNQRP ERDESSGSKD KSDQKTLRRL AQNREAARKS RLRKKAYVQQ
201: LESSRLKLTQ LEQELQRSRQ QGIFISSTGD QAQSMSGNGA MAFDVEYARW LEEHNRQTNE LRAAINSHAG DIELRTIVDN FMTQFDDIFR LKGIAAKADV
301: FHILSGMWKT PAERCFMWIG GFRSSELLKL LLSQLEPLAE QQLMGIYNLQ QSSQQTEDAL SQGMDALQQS LSETLANGSP SSSGSSGNVA NYMGQMAMAM
401: GKLGTLEGFL HQADNLRQQT LQQMLRILTT RQSARALLAI SDYFSRLRAL SSLWLARPRE
101: DINLSAAIAA SQALVFQKDS QPTLASTSAG RENWGETNMA DASPRTDTST DDTEDKNQRP ERDESSGSKD KSDQKTLRRL AQNREAARKS RLRKKAYVQQ
201: LESSRLKLTQ LEQELQRSRQ QGIFISSTGD QAQSMSGNGA MAFDVEYARW LEEHNRQTNE LRAAINSHAG DIELRTIVDN FMTQFDDIFR LKGIAAKADV
301: FHILSGMWKT PAERCFMWIG GFRSSELLKL LLSQLEPLAE QQLMGIYNLQ QSSQQTEDAL SQGMDALQQS LSETLANGSP SSSGSSGNVA NYMGQMAMAM
401: GKLGTLEGFL HQADNLRQQT LQQMLRILTT RQSARALLAI SDYFSRLRAL SSLWLARPRE
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.