Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59415 | Soybean | nucleus | 91.82 | 94.05 |
| KRG97639 | Soybean | nucleus | 72.03 | 75.41 |
| KRH31239 | Soybean | nucleus | 70.71 | 73.63 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 64.38 | 69.91 |
| AT5G10030.3 | Thale cress | nucleus | 63.59 | 66.21 |
| AT5G65210.2 | Thale cress | nucleus | 63.32 | 65.22 |
| Bra028604.1-P | Field mustard | nucleus | 62.01 | 64.92 |
| CDX85782 | Canola | nucleus | 62.01 | 64.92 |
| CDY40074 | Canola | nucleus | 61.48 | 64.36 |
| CDY08810 | Canola | nucleus | 61.48 | 63.49 |
| Bra024366.1-P | Field mustard | nucleus | 61.48 | 63.49 |
| CDY33975 | Canola | nucleus | 61.74 | 63.24 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 60.69 | 63.01 |
| Bra031871.1-P | Field mustard | nucleus | 61.48 | 62.97 |
| CDY37811 | Canola | nucleus | 61.48 | 62.97 |
| CDY14552 | Canola | nucleus | 60.69 | 62.67 |
| Bra009063.1-P | Field mustard | nucleus | 59.89 | 62.36 |
| CDX69866 | Canola | nucleus | 59.89 | 62.36 |
| CDY21625 | Canola | nucleus | 59.37 | 61.81 |
| CDY18683 | Canola | cytosol | 59.37 | 60.48 |
| CDX81273 | Canola | nucleus | 60.69 | 59.13 |
| PGSC0003DMT400033308 | Potato | nucleus | 55.15 | 58.71 |
| Solyc04g011670.2.1 | Tomato | nucleus | 57.78 | 58.56 |
| Solyc04g054320.2.1 | Tomato | nucleus | 56.99 | 58.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.83 | 57.63 |
| GSMUA_Achr10P... | Banana | nucleus | 52.24 | 56.41 |
| Bra037809.1-P | Field mustard | nucleus | 58.05 | 56.12 |
| KRH63045 | Soybean | cytosol | 13.19 | 53.19 |
| KRH36324 | Soybean | nucleus | 46.17 | 52.71 |
| KRH66777 | Soybean | nucleus | 39.58 | 51.72 |
| PGSC0003DMT400016235 | Potato | nucleus | 52.51 | 50.77 |
| Zm00001d016312_P001 | Maize | cytosol | 12.4 | 50.54 |
| KRH53141 | Soybean | nucleus | 46.97 | 50.14 |
| KRH16629 | Soybean | nucleus | 48.02 | 49.19 |
| KRH18838 | Soybean | nucleus | 47.76 | 48.92 |
| KRH64780 | Soybean | nucleus | 46.7 | 48.9 |
| Os04t0637000-01 | Rice | nucleus | 49.87 | 47.61 |
| KRG92164 | Soybean | nucleus | 28.23 | 45.53 |
| KXG27222 | Sorghum | nucleus | 48.81 | 45.34 |
| KRH34622 | Soybean | cytosol | 26.91 | 44.16 |
| Zm00001d026398_P006 | Maize | nucleus | 47.49 | 43.69 |
| Bra037374.1-P | Field mustard | nucleus | 35.88 | 43.31 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 47.76 | 43.2 |
| KXG38496 | Sorghum | nucleus | 35.36 | 43.09 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 48.02 | 42.82 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 48.55 | 42.3 |
| KRG93068 | Soybean | nucleus | 48.02 | 40.99 |
| Zm00001d024160_P003 | Maize | nucleus | 45.38 | 40.57 |
| KRH20680 | Soybean | nucleus | 49.08 | 39.66 |
| KRG95103 | Soybean | nucleus | 47.23 | 39.0 |
| Os08t0176900-01 | Rice | nucleus | 39.58 | 38.56 |
| Zm00001d002143_P002 | Maize | cytosol | 44.59 | 38.5 |
| KRH66771 | Soybean | nucleus | 46.44 | 38.26 |
| Zm00001d041428_P001 | Maize | cytosol | 15.57 | 37.82 |
| KRH13334 | Soybean | nucleus | 47.49 | 36.22 |
| KRH21813 | Soybean | nucleus | 15.3 | 36.02 |
| KRH35977 | Soybean | nucleus | 43.27 | 35.96 |
| KRG90784 | Soybean | nucleus | 43.01 | 35.82 |
| KRH70569 | Soybean | nucleus | 43.27 | 35.12 |
| OQU79985 | Sorghum | golgi, vacuole | 46.97 | 34.5 |
| KRH75411 | Soybean | nucleus | 43.8 | 34.16 |
| KRH26635 | Soybean | nucleus | 43.8 | 34.02 |
| KRH22685 | Soybean | nucleus | 43.27 | 33.47 |
| KRH30432 | Soybean | nucleus | 42.48 | 32.66 |
| KRH67029 | Soybean | nucleus | 42.22 | 32.59 |
| KRH25227 | Soybean | nucleus | 42.74 | 32.34 |
| KRH71904 | Soybean | nucleus | 41.16 | 32.23 |
| KRG95350 | Soybean | nucleus | 41.69 | 32.18 |
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 14.78 | 31.46 |
| KRH32997 | Soybean | nucleus | 41.42 | 30.37 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 30.87 | 27.66 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100780003 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | UniProt:A0A0R0IQB8 | EMBL:ACUP02004851 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_08G140100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | InterPro:IPR025422 | EnsemblPlants:KRH43266 |
| ProteinID:KRH43266 | ProteinID:KRH43266.1 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF180 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain |
| UniParc:UPI0003DEAD28 | InterPro:bZIP | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:10718981..10724855
Molecular Weight (calculated)
43107.6 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.466
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATSSQFVS SRRMGVYDPI HQISMWEETF KSNDTNNLTV STSIIGEVEM KLDNQVHVQS EDASHGIFGT SVKYDQDANR LTDKTQRRLA QNREAARKSR
101: LRKKAYVQQL ESCRLKLVQL EQEVDHAKQQ ATKLQGLYIG DGLGSNNLGF AGSVNSGITL FKMEYGNWLE EQNRQILELR TALSSHIGDI QLGTLVQGIM
201: NHYTKLFSMK SAAAKADVFY VMSGMWKTTA ERFFLWIGGF RPSELLKVLV PLSEPLTEQQ RFDAYGLEKS CQQAEDALSQ GMEKLQQMLA DSVGPGQLVE
301: GTHIPQMDTA MERLEALVSF VNQADHLRQE TLRQMYRILT TRQTGRFLLD LGEYFQRLRA LSKLWANRPQ ELTKSVIKH
101: LRKKAYVQQL ESCRLKLVQL EQEVDHAKQQ ATKLQGLYIG DGLGSNNLGF AGSVNSGITL FKMEYGNWLE EQNRQILELR TALSSHIGDI QLGTLVQGIM
201: NHYTKLFSMK SAAAKADVFY VMSGMWKTTA ERFFLWIGGF RPSELLKVLV PLSEPLTEQQ RFDAYGLEKS CQQAEDALSQ GMEKLQQMLA DSVGPGQLVE
301: GTHIPQMDTA MERLEALVSF VNQADHLRQE TLRQMYRILT TRQTGRFLLD LGEYFQRLRA LSKLWANRPQ ELTKSVIKH
001: MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
Arabidopsis Description
TGA1Transcription factor TGA1 [Source:UniProtKB/Swiss-Prot;Acc:Q39237]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.