Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93068
KRG94592
KRH01571
KRH06898
KRH13334
KRH20680
KRH36324
KRH37416
KRH66789
KRH70543
KRH72058

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G06960.1 KRH37416 AT1G64280.1 10659709
AT5G06960.1 KRH37416 AT1G64280.1 10662863
AT5G06960.1 KRH37416 AT1G64280.1 12383081
AT5G06960.1 KRH37416 AT1G64280.1 15634206
AT5G06960.1 KRH66789 AT2G41370.1 21798944
AT5G06960.1 KRH72058 AT2G41370.1 21798944
AT5G06960.1 KRG94592 AT3G02000.1 19218396
AT5G06960.1 KRH01571 AT3G02000.1 19218396
AT5G06960.1 KRH06898 AT3G02000.1 19218396
AT5G06960.1 KRH70543 AT3G02000.1 19218396
AT5G06960.1 KRG93068 AT5G06960.1 17098811
AT5G06960.1 KRH13334 AT5G06960.1 17098811
AT5G06960.1 KRH20680 AT5G06960.1 17098811
AT5G06960.1 KRH36324 AT5G06960.1 17098811
AT5G06960.1 KRG93068 AT5G06960.1 21798944
AT5G06960.1 KRH13334 AT5G06960.1 21798944
AT5G06960.1 KRH20680 AT5G06960.1 21798944
AT5G06960.1 KRH36324 AT5G06960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g064950.1.1 Tomato nucleus 85.24 87.35
PGSC0003DMT400024428 Potato nucleus 85.24 87.35
GSMUA_Achr3P25020_001 Banana nucleus 84.64 84.64
GSMUA_Achr8P05800_001 Banana nucleus 83.73 83.73
Os01t0279900-01 Rice nucleus 82.23 82.98
Os03t0318600-01 Rice nucleus 82.83 82.58
EES02530 Sorghum nucleus 81.93 82.42
KXG39494 Sorghum nucleus 82.83 82.09
Solyc01g008730.2.1 Tomato nucleus 80.12 81.35
TraesCS4B01G178600.1 Wheat nucleus 81.63 81.14
HORVU4Hr1G052330.3 Barley nucleus 81.63 81.14
TraesCS3B01G220400.2 Wheat nucleus 81.02 81.02
TraesCS3A01G190700.2 Wheat nucleus 81.02 81.02
HORVU3Hr1G042790.4 Barley nucleus 80.72 80.97
TraesCS4D01G180200.4 Wheat nucleus 81.63 80.9
TraesCS4A01G126300.2 Wheat nucleus 81.63 80.9
TraesCS2B01G113200.2 Wheat nucleus 81.63 80.65
TraesCS3D01G194800.2 Wheat nucleus 80.42 80.42
CDY08443 Canola nucleus 80.12 80.36
TraesCS2D01G096800.2 Wheat nucleus 81.33 80.36
Bra034767.1-P Field mustard nucleus 79.82 80.06
TraesCS2A01G097500.2 Wheat nucleus 81.02 80.06
AT5G06950.5 Thale cress nucleus 79.52 80.0
Os07t0687700-01 Rice nucleus 80.42 79.94
Zm00001d022542_P002 Maize nucleus 80.12 79.88
KXG36997 Sorghum nucleus 79.82 79.58
Bra009241.1-P Field mustard nucleus 73.19 78.39
CDY52616 Canola nucleus 78.61 78.38
CDY50562 Canola nucleus 78.61 78.14
Bra038705.1-P Field mustard nucleus 78.61 78.14
Bra001443.1-P Field mustard nucleus 77.71 77.95
CDX73830 Canola nucleus 77.71 77.95
HORVU3Hr1G042830.1 Barley cytosol, mitochondrion, nucleus, plastid 34.94 77.85
CDX70053 Canola nucleus 76.2 77.37
CDY00762 Canola nucleus 77.11 77.34
AT5G06960.1 Thale cress nucleus 76.81 77.27
CDX98971 Canola nucleus 76.2 77.13
HORVU2Hr1G016580.5 Barley nucleus 77.71 76.56
PGSC0003DMT400026710 Potato mitochondrion 40.06 75.57
Bra028713.1-P Field mustard nucleus 74.1 75.46
CDY14061 Canola nucleus 74.1 75.46
CDY05010 Canola nucleus 73.8 75.15
AT3G12250.4 Thale cress nucleus 79.82 74.65
KRG93068 Soybean nucleus 97.89 73.2
KRH66777 Soybean nucleus 62.65 71.72
CDY42138 Canola nucleus 68.98 70.68
KXG22247 Sorghum nucleus 67.77 67.77
Zm00001d008225_P001 Maize nucleus 82.23 65.0
VIT_13s0084g00660.t01 Wine grape nucleus 90.66 64.18
KRH20680 Soybean nucleus 90.36 63.97
Zm00001d028936_P001 Maize nucleus 75.3 63.94
Os05t0492000-00 Rice nucleus 62.95 63.33
GSMUA_Achr10P... Banana nucleus 85.54 62.14
Zm00001d010658_P001 Maize nucleus 63.25 60.87
TraesCS1A01G096300.1 Wheat nucleus 60.84 60.3
KRH13334 Soybean nucleus 89.76 59.96
KRH66771 Soybean nucleus 81.93 59.13
TraesCS1B01G127400.1 Wheat nucleus 60.54 59.12
KRG95103 Soybean nucleus 81.63 59.04
TraesCS1D01G105300.1 Wheat nucleus 60.24 59.0
GSMUA_Achr11P... Banana nucleus 84.94 59.0
EES03778 Sorghum nucleus 80.42 57.05
TraesCS3A01G334100.1 Wheat nucleus 80.72 56.42
HORVU3Hr1G079010.5 Barley nucleus 81.02 56.39
TraesCS3B01G365100.1 Wheat nucleus 80.42 55.97
TraesCS3D01G327600.1 Wheat nucleus 80.12 55.77
HORVU1Hr1G068220.1 Barley nucleus 55.72 53.94
KRH63045 Soybean cytosol 15.06 53.19
Zm00001d043153_P001 Maize nucleus 65.06 51.18
KRG97639 Soybean nucleus 55.72 51.1
KRH35977 Soybean nucleus 69.88 50.88
KRH31239 Soybean nucleus 55.42 50.55
KRG90784 Soybean nucleus 68.67 50.11
Zm00001d012553_P003 Maize nucleus 70.48 49.79
KRH59415 Soybean nucleus 53.01 47.57
KRH53141 Soybean nucleus 50.3 47.04
KRH70569 Soybean nucleus 65.36 46.47
KRH43266 Soybean nucleus 52.71 46.17
KRH75411 Soybean nucleus 67.47 46.09
KRH64780 Soybean nucleus 49.1 45.03
Os01t0808100-01 Rice nucleus 48.49 44.23
KRH18838 Soybean nucleus 48.8 43.78
KRH16629 Soybean nucleus 47.89 42.97
KRG92164 Soybean nucleus 29.82 42.13
HORVU0Hr1G032230.4 Barley nucleus 44.28 41.88
KRH67029 Soybean nucleus 60.24 40.73
KRH21813 Soybean nucleus 19.58 40.37
KRG95350 Soybean nucleus 59.64 40.33
KRH34622 Soybean cytosol 27.71 39.83
KRH71904 Soybean nucleus 56.63 38.84
KRH22685 Soybean nucleus 56.33 38.16
KRH26635 Soybean nucleus 56.02 38.11
KRH30432 Soybean nucleus 55.42 37.32
KRH25227 Soybean nucleus 56.02 37.13
KRH32997 Soybean nucleus 56.33 36.17
KRH39187 Soybean cytosol, extracellular, nucleus 19.28 35.96
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1MapMan:15.5.4.7.1MapMan:26.8.3.1.2EMBL:ACUP02006723ncoils:Coil
EnsemblPlantsGene:GLYMA_10G296200GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565InterPro:IPR004827InterPro:IPR025422UniProt:K7LM73EnsemblPlants:KRH36324
ProteinID:KRH36324ProteinID:KRH36324.1ProteinID:KRH36325.1PFAM:PF07716PFAM:PF14144ScanProsite:PS00036
PFscan:PS50217PFscan:PS51806PANTHER:PTHR22952PANTHER:PTHR22952:SF244SMART:SM00338SUPFAM:SSF57959
InterPro:TGA_domainUniParc:UPI00023CE3B6InterPro:bZIPSEG:seg::
Description
hypothetical protein
Coordinates
chr10:-:51306677..51314923
Molecular Weight (calculated)
37144.0 Da
IEP (calculated)
9.360
GRAVY (calculated)
-0.563
Length
332 amino acids
Sequence
(BLAST)
001: MADASPRTDI STDVDTDDKN PRFDRSQSLV AVASDSSDRS KDKSDQKSLR RLAQNREAAR KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISNS
101: GDQAHSMSGN GAMAFDVEYA RWLEEQNRQI NELRAGVNSH AGDTELRMII DGIMAHYDEI FRLKANAAKA DVFHLLSGMW KTPAERCFLW LGGFRSSELL
201: KLLVNQLEPL TEQQLVGITN LQQSSQQAED ALSQGMEALQ QSLSETLSTG SLGSSGSSGN VANYMGQMAM AMGKLGTLEG FIKQADNLRQ QTLHQIHRIL
301: TTRQSARALL AIHDYFSRLR ALSSLWLARP RD
Best Arabidopsis Sequence Match ( AT3G12250.1 )
(BLAST)
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.