Factsheet for Os07t0687700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0194300-01
Os01t0279900-01
Os01t0808100-01
Os01t0948900-01
Os02t0512400-01
Os03t0318600-01
Os04t0393500-01
Os05t0492000-00
Os07t0687700-01
Os11t0141900-00
Os12t0138500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06960.1	Os01t0194300-01	AT1G64280.1	10659709
AT5G06960.1	Os01t0194300-01	AT1G64280.1	10662863
AT5G06960.1	Os01t0194300-01	AT1G64280.1	12383081
AT5G06960.1	Os01t0194300-01	AT1G64280.1	15634206
AT5G06960.1	Os01t0948900-01	AT2G41370.1	21798944
AT5G06960.1	Os11t0141900-00	AT2G41370.1	21798944
AT5G06960.1	Os12t0138500-01	AT2G41370.1	21798944
AT5G06960.1	Os02t0512400-01	AT3G02000.1	19218396
AT5G06960.1	Os04t0393500-01	AT3G02000.1	19218396
AT5G06960.1	Os01t0279900-01	AT5G06960.1	17098811
AT5G06960.1	Os01t0808100-01	AT5G06960.1	17098811
AT5G06960.1	Os03t0318600-01	AT5G06960.1	17098811
AT5G06960.1	Os05t0492000-00	AT5G06960.1	17098811
AT5G06960.1	Os07t0687700-01	AT5G06960.1	17098811
AT5G06960.1	Os01t0279900-01	AT5G06960.1	21798944
AT5G06960.1	Os01t0808100-01	AT5G06960.1	21798944
AT5G06960.1	Os03t0318600-01	AT5G06960.1	21798944
AT5G06960.1	Os05t0492000-00	AT5G06960.1	21798944
AT5G06960.1	Os07t0687700-01	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36997	Sorghum	nucleus	93.41	93.69
Zm00001d022542_P002	Maize	nucleus	93.11	93.39
TraesCS2B01G113200.2	Wheat	nucleus	93.11	92.56
TraesCS2D01G096800.2	Wheat	nucleus	92.81	92.26
TraesCS2A01G097500.2	Wheat	nucleus	92.52	91.96
Os03t0318600-01	Rice	nucleus	90.42	90.69
HORVU2Hr1G016580.5	Barley	nucleus	88.62	87.83
Os01t0279900-01	Rice	nucleus	80.24	81.46
Solyc11g064950.1.1	Tomato	nucleus	78.14	80.56
PGSC0003DMT400024428	Potato	nucleus	78.14	80.56
KRH36324	Soybean	nucleus	79.94	80.42
Solyc01g008730.2.1	Tomato	nucleus	75.75	77.37
Bra009241.1-P	Field mustard	nucleus	70.66	76.13
AT5G06950.5	Thale cress	nucleus	74.85	75.76
CDY08443	Canola	nucleus	74.85	75.53
Bra034767.1-P	Field mustard	nucleus	74.55	75.23
CDX73830	Canola	nucleus	73.95	74.62
CDY00762	Canola	nucleus	73.95	74.62
Bra001443.1-P	Field mustard	nucleus	73.95	74.62
CDX70053	Canola	nucleus	72.46	74.01
CDX98971	Canola	nucleus	72.46	73.78
CDY50562	Canola	nucleus	73.65	73.65
Bra038705.1-P	Field mustard	nucleus	73.65	73.65
CDY52616	Canola	nucleus	73.35	73.57
PGSC0003DMT400026710	Potato	mitochondrion	38.32	72.73
AT5G06960.1	Thale cress	nucleus	71.26	72.12
CDY05010	Canola	nucleus	69.76	71.47
Bra028713.1-P	Field mustard	nucleus	69.46	71.17
CDY14061	Canola	nucleus	69.46	71.17
AT3G12250.4	Thale cress	nucleus	74.85	70.42
KRH66777	Soybean	nucleus	58.08	66.9
CDY42138	Canola	nucleus	64.37	66.36
PGSC0003DMT400060922	Potato	nucleus	51.2	63.81
Os05t0492000-00	Rice	nucleus	61.38	62.12
Solyc10g080780.1.1	Tomato	cytosol	50.0	62.08
Os10t0566200-00	Rice	extracellular	21.56	61.02
KRG93068	Soybean	nucleus	79.34	59.68
VIT_13s0084g00660.t01	Wine grape	nucleus	82.04	58.42
VIT_08s0007g05170.t01	Wine grape	nucleus	78.74	58.31
PGSC0003DMT400060926	Potato	nucleus	74.85	57.74
Os06t0265400-01	Rice	nucleus	64.97	56.36
KRH20680	Soybean	nucleus	79.04	56.29
Solyc10g080770.1.1	Tomato	nucleus	74.85	55.56
KRH66771	Soybean	nucleus	74.25	53.91
KRG95103	Soybean	nucleus	73.95	53.81
KRH13334	Soybean	nucleus	78.74	52.92
Os01t0882200-00	Rice	cytosol, extracellular	21.56	50.7
GSMUA_Achr8P21670_001	Banana	nucleus	80.84	46.39
Os01t0808100-01	Rice	nucleus	46.71	42.86
Os04t0637000-01	Rice	nucleus	48.5	40.81
Os11t0152700-01	Rice	nucleus	56.29	38.84
Os12t0152900-01	Rice	nucleus	54.79	37.42
Os05t0443900-01	Rice	nucleus	50.9	35.12
Os09t0280500-01	Rice	nucleus	48.5	34.69
Os06t0614100-01	Rice	nucleus	45.21	33.48
Os08t0176900-01	Rice	nucleus	38.92	33.42
Os09t0489500-02	Rice	nucleus	51.8	33.08
Os01t0859500-01	Rice	nucleus	52.4	32.47
Os02t0194900-00	Rice	nucleus	35.93	32.17
Os01t0859600-01	Rice	cytosol	15.87	12.71

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	MapMan:26.8.3.1.2	EntrezGene:4344349	EMBL:AB051295
EMBL:AK100440	ProteinID:BAC79596.1	ProteinID:BAD30297.1	ProteinID:BAF22609.1	ProteinID:BAT03308.1	ncoils:Coil
ProteinID:EEE67849.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0042742	GO:GO:0043565
GO:GO:0045893	EMBL:HQ858807	InterPro:IPR004827	InterPro:IPR025422	EnsemblPlantsGene:Os07g0687700	EnsemblPlants:Os07t0687700-01
PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952
PANTHER:PTHR22952:SF220	UniProt:Q7X993	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000009EB58
RefSeq:XP_015647505.1	RefSeq:XP_015647506.1	InterPro:bZIP	SEG:seg	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 63Similar to Transcription factor HBP-1b(C38) (Fragment). (Os07t0687700-01)

Coordinates

chr7:+:29213488..29217245

Molecular Weight (calculated)

37217.2 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.495

Length

334 amino acids

Sequence
(BLAST)

001: MADASSRTDT SIVVDNDDKN HQLENGHSGA VMASNSSDRS DRSDKLMDQK TIRRLAQNRE AARKSRLRKK AYVQQLESSK LKLAQLEQEL QKARQQGIFI
101: SSSGDQTHAM SGNGALTFDL EYTRWLEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEVFKVKGVA AKADVFHILS GMWKTPAERC FLWLGGFRPS
201: ELLKLLANHL EPLTEQQLLG LNNLQESSQQ AEDALSQGME ALQQSLADTL AGSLGSSGSS GNVANYMGQM AMAMGKLGTL ENFLCQADNL RQQTLHQMQR
301: ILTIRQASRA LLAIHDYFSR LRALSSLWLA RPRE

Best Arabidopsis Sequence Match ( AT5G06950.2 )
(BLAST)

001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE

Arabidopsis Description

TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.