Factsheet for PGSC0003DMT400060922

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080780.1.1	Tomato	cytosol	75.75	75.46
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	35.07	63.09
PGSC0003DMT400026710	Potato	mitochondrion	38.81	59.09
PGSC0003DMT400024428	Potato	nucleus	66.42	54.94
GSMUA_Achr3P25020_001	Banana	nucleus	65.67	53.01
GSMUA_Achr8P05800_001	Banana	nucleus	64.93	52.41
Os01t0279900-01	Rice	nucleus	63.43	51.67
TraesCS3B01G220400.2	Wheat	nucleus	63.81	51.51
TraesCS3A01G190700.2	Wheat	nucleus	63.81	51.51
HORVU3Hr1G042790.4	Barley	nucleus	63.43	51.36
Os03t0318600-01	Rice	nucleus	63.81	51.35
EES02530	Sorghum	nucleus	63.06	51.21
Os07t0687700-01	Rice	nucleus	63.81	51.2
Zm00001d022542_P002	Maize	nucleus	63.43	51.05
KXG36997	Sorghum	nucleus	63.43	51.05
TraesCS3D01G194800.2	Wheat	nucleus	63.06	50.9
KXG39494	Sorghum	nucleus	63.43	50.75
HORVU4Hr1G052330.3	Barley	nucleus	63.06	50.6
TraesCS4B01G178600.1	Wheat	nucleus	63.06	50.6
TraesCS4A01G126300.2	Wheat	nucleus	63.06	50.45
TraesCS4D01G180200.4	Wheat	nucleus	63.06	50.45
KRH66777	Soybean	nucleus	54.48	50.34
TraesCS2D01G096800.2	Wheat	nucleus	63.06	50.3
TraesCS2B01G113200.2	Wheat	nucleus	63.06	50.3
TraesCS2A01G097500.2	Wheat	nucleus	62.69	50.0
HORVU2Hr1G016580.5	Barley	nucleus	61.94	49.26
KXG22247	Sorghum	nucleus	56.72	45.78
PGSC0003DMT400060926	Potato	nucleus	73.13	45.27
Zm00001d028936_P001	Maize	nucleus	61.94	42.46
Os05t0492000-00	Rice	nucleus	50.37	40.91
Zm00001d010658_P001	Maize	nucleus	51.87	40.29
Zm00001d008225_P001	Maize	nucleus	63.06	40.24
VIT_08s0007g05170.t01	Wine grape	nucleus	67.16	39.91
TraesCS1A01G096300.1	Wheat	nucleus	48.13	38.51
GSMUA_Achr10P...	Banana	nucleus	65.3	38.29
KRH66771	Soybean	nucleus	64.93	37.83
KRG95103	Soybean	nucleus	64.18	37.47
TraesCS1D01G105300.1	Wheat	nucleus	47.01	37.17
HORVU3Hr1G079010.5	Barley	nucleus	66.04	37.11
TraesCS1B01G127400.1	Wheat	nucleus	47.01	37.06
TraesCS3A01G334100.1	Wheat	nucleus	65.3	36.84
PGSC0003DMT400067782	Potato	nucleus	45.15	36.78
EES03778	Sorghum	nucleus	64.18	36.75
TraesCS3B01G365100.1	Wheat	nucleus	65.3	36.69
TraesCS3D01G327600.1	Wheat	nucleus	65.3	36.69
GSMUA_Achr11P...	Banana	nucleus	64.18	35.98
HORVU1Hr1G068220.1	Barley	nucleus	44.03	34.4
PGSC0003DMT400029743	Potato	nucleus, plastid	48.13	33.95
PGSC0003DMT400043651	Potato	nucleus	44.78	33.24
PGSC0003DMT400033741	Potato	nucleus	58.58	32.51
PGSC0003DMT400070884	Potato	nucleus	43.28	32.13
PGSC0003DMT400033308	Potato	nucleus	42.16	31.74
PGSC0003DMT400016235	Potato	nucleus	45.9	31.38
Zm00001d043153_P001	Maize	nucleus	49.25	31.28
Zm00001d012553_P003	Maize	nucleus	52.99	30.21
PGSC0003DMT400018306	Potato	nucleus	51.49	28.28
PGSC0003DMT400060865	Potato	nucleus	48.13	27.98
HORVU0Hr1G032230.4	Barley	nucleus	30.22	23.08
Os01t0808100-01	Rice	nucleus	30.22	22.25

Protein Annotations

EnsemblPlants:PGSC0003DMT400060922	EnsemblPlantsGene:PGSC0003DMG401023696	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR025422	InterPro:TGA_domain	PANTHER:PTHR22952	PANTHER:PTHR22952:SF206	PFAM:PF14144
PFscan:PS51806	PGSC:PGSC0003DMG401023696	UniParc:UPI000296FC01	UniProt:M1C6P3	MapMan:15.5.4.7.1	:

Description

NPR1-interactor protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG401023696]

Coordinates

chr10:-:57190668..57194203

Molecular Weight (calculated)

30191.0 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.422

Length

268 amino acids

Sequence
(BLAST)

001: MGDREGPRLV SSTALWRGER RPAQIVQVSQ LEQDFQRAPQ QRESGSLPFD TEYSRWLEEH TKHINELRTA VNSHASDPEL RSIVDNVIAH YDEVYRMKAN
101: TAKGNVEHLL SGMWKTPAER CFMWIGDFRP SLLLKLLGNQ LEPLSEQQLL AIENLQLSSH NSEDALSQGM QALEQSLGET LAIGSPFTEG SSGNVATKYM
201: GQMEMAMGKL ATLEAFFHQA DLLRQRALHQ MHCVLTTRQS ARALLAISGY FSGLRALSSI WLARPREQ

Best Arabidopsis Sequence Match ( AT5G06950.1 )
(BLAST)

001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE

Arabidopsis Description

TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.