Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060922 | Potato | nucleus | 75.46 | 75.75 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 33.83 | 61.07 |
| Solyc11g064950.1.1 | Tomato | nucleus | 64.68 | 53.7 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 64.68 | 52.41 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 63.94 | 51.81 |
| Solyc01g008730.2.1 | Tomato | nucleus | 62.45 | 51.38 |
| Os01t0279900-01 | Rice | nucleus | 62.83 | 51.37 |
| Os03t0318600-01 | Rice | nucleus | 63.57 | 51.35 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 62.83 | 50.9 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 62.83 | 50.9 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 62.45 | 50.76 |
| EES02530 | Sorghum | nucleus | 62.08 | 50.61 |
| KXG36997 | Sorghum | nucleus | 62.45 | 50.45 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 62.08 | 50.3 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 62.45 | 50.3 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 62.45 | 50.3 |
| Zm00001d022542_P002 | Maize | nucleus | 62.08 | 50.15 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 62.45 | 50.15 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 62.45 | 50.15 |
| KXG39494 | Sorghum | nucleus | 62.45 | 50.15 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 62.45 | 50.0 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 62.45 | 50.0 |
| Os07t0687700-01 | Rice | nucleus | 62.08 | 50.0 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 62.08 | 49.7 |
| KRH66777 | Soybean | nucleus | 53.16 | 49.31 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 61.34 | 48.96 |
| KXG22247 | Sorghum | nucleus | 55.02 | 44.58 |
| Solyc10g080770.1.1 | Tomato | nucleus | 71.75 | 42.89 |
| Zm00001d028936_P001 | Maize | nucleus | 61.34 | 42.2 |
| Os05t0492000-00 | Rice | nucleus | 50.19 | 40.91 |
| VIT_08s0007g05170.t01 | Wine grape | nucleus | 67.29 | 40.13 |
| Zm00001d010658_P001 | Maize | nucleus | 51.3 | 40.0 |
| Zm00001d008225_P001 | Maize | nucleus | 62.08 | 39.76 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 48.33 | 38.81 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 47.58 | 37.76 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 47.58 | 37.65 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 66.17 | 37.32 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 65.8 | 37.26 |
| KRG95103 | Soybean | nucleus | 63.57 | 37.25 |
| GSMUA_Achr10P... | Banana | nucleus | 63.2 | 37.2 |
| EES03778 | Sorghum | nucleus | 64.68 | 37.18 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 65.8 | 37.11 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 65.8 | 37.11 |
| KRH66771 | Soybean | nucleus | 63.2 | 36.96 |
| GSMUA_Achr11P... | Banana | nucleus | 62.83 | 35.36 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 44.24 | 34.69 |
| Solyc12g056860.1.1 | Tomato | nucleus | 43.12 | 33.33 |
| Solyc04g011670.2.1 | Tomato | nucleus | 46.1 | 33.16 |
| Solyc11g068370.1.1 | Tomato | nucleus | 45.35 | 32.8 |
| Zm00001d043153_P001 | Maize | nucleus | 50.56 | 32.23 |
| Solyc04g072460.2.1 | Tomato | nucleus | 43.12 | 32.13 |
| Solyc05g009660.2.1 | Tomato | nucleus | 57.62 | 32.02 |
| Zm00001d012553_P003 | Maize | nucleus | 54.65 | 31.28 |
| Solyc04g054320.2.1 | Tomato | nucleus | 42.01 | 30.54 |
| Solyc06g074320.2.1 | Tomato | nucleus | 50.19 | 26.95 |
| Solyc10g080410.1.1 | Tomato | nucleus | 44.61 | 26.14 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 32.71 | 25.07 |
| Solyc10g078670.1.1 | Tomato | nucleus | 45.35 | 25.05 |
| Os01t0808100-01 | Rice | nucleus | 30.86 | 22.8 |
Protein Annotations
| EnsemblPlants:Solyc10g080780.1.1 | EnsemblPlantsGene:Solyc10g080780.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | InterPro:TGA_domain | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF255 |
| PFAM:PF14144 | PFscan:PS51806 | UniParc:UPI000276960D | UniProt:K4D2W8 | MapMan:15.5.4.7.1 | : |
Description
No Description!
Coordinates
chr10:+:61982425..61985505
Molecular Weight (calculated)
30502.6 Da
IEP (calculated)
6.311
GRAVY (calculated)
-0.288
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAMGDSEGH RIVSSTALWR GDRRPAQIVQ VSQLEQDIER APQQGESGPV AFDTDYIRWL EEHDKHINEL RNAVKSHARD PELRRIADNV TAHYDEVFRM
101: KGNAAKADVV HVLSGMWKTP AERCCMWIGG FRPSLLLKLL VNQLDPLSEQ QVADFNNLQL SSHHAEVALS QGMEALQLSL GETLAMGSPF TESGNVATTY
201: MCQMAMAMGK LMTLEDFLRQ ADSLRQLVLQ QIYRILTTRQ YARALLAIND YFSIFRVLSS IWLARPREQ
101: KGNAAKADVV HVLSGMWKTP AERCCMWIGG FRPSLLLKLL VNQLDPLSEQ QVADFNNLQL SSHHAEVALS QGMEALQLSL GETLAMGSPF TESGNVATTY
201: MCQMAMAMGK LMTLEDFLRQ ADSLRQLVLQ QIYRILTTRQ YARALLAIND YFSIFRVLSS IWLARPREQ
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Arabidopsis Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.