Factsheet for Solyc06g074320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018306	Potato	nucleus	95.21	97.75
Solyc11g068370.1.1	Tomato	nucleus	55.29	74.46
VIT_06s0080g00360.t01	Wine grape	nucleus	71.66	71.8
KRH26635	Soybean	nucleus	67.27	69.06
KRH30432	Soybean	nucleus	67.27	68.36
KRH22685	Soybean	nucleus	66.67	68.16
Bra018634.1-P	Field mustard	nucleus	63.87	67.37
AT1G08320.4	Thale cress	nucleus	64.47	67.15
KRH25227	Soybean	nucleus	67.07	67.07
CDX95068	Canola	nucleus	63.47	66.53
CDX93571	Canola	nucleus	63.47	66.53
Zm00001d023424_P001	Maize	nucleus	40.92	66.13
Bra031622.1-P	Field mustard	nucleus	56.29	65.89
CDY22689	Canola	nucleus	55.89	65.42
CDY06309	Canola	nucleus	62.48	64.67
HORVU4Hr1G025130.10	Barley	nucleus	44.31	61.16
Solyc11g064950.1.1	Tomato	nucleus	39.12	60.49
GSMUA_Achr11P...	Banana	cytosol	29.14	60.33
GSMUA_Achr2P06770_001	Banana	nucleus	56.49	59.2
Solyc01g008730.2.1	Tomato	nucleus	37.52	57.49
KXG22976	Sorghum	nucleus	55.09	57.14
GSMUA_Achr11P...	Banana	nucleus	55.49	56.5
Zm00001d052543_P001	Maize	nucleus	54.69	56.38
OQU82891	Sorghum	nucleus	54.29	55.74
GSMUA_Achr5P26200_001	Banana	nucleus	43.91	54.19
Os11t0152700-01	Rice	nucleus	52.3	54.13
GSMUA_Achr10P...	Banana	nucleus	50.7	53.81
Os12t0152900-01	Rice	nucleus	52.49	53.78
Os05t0443900-01	Rice	nucleus	49.9	51.65
GSMUA_Achr3P22700_001	Banana	nucleus	51.9	51.38
Solyc10g080780.1.1	Tomato	cytosol	26.95	50.19
Os01t0859500-01	Rice	nucleus	53.49	49.72
KXG33735	Sorghum	nucleus	52.1	48.97
Solyc10g080770.1.1	Tomato	nucleus	42.52	47.33
TraesCS4D01G129900.1	Wheat	nucleus	50.7	47.21
TraesCS4A01G183400.2	Wheat	nucleus	50.7	46.95
HORVU1Hr1G073870.2	Barley	nucleus	48.9	46.85
Zm00001d038296_P001	Maize	nucleus	48.3	46.63
TraesCS1B01G285800.1	Wheat	nucleus	48.9	46.58
TraesCS1A01G276600.2	Wheat	nucleus	48.7	46.39
TraesCS1D01G276100.2	Wheat	nucleus	48.5	46.2
OQU78097	Sorghum	nucleus	48.1	46.17
Zm00001d012294_P009	Maize	nucleus	51.1	46.13
TraesCS4B01G135000.1	Wheat	nucleus	51.9	45.94
TraesCS3B01G404800.2	Wheat	nucleus	52.3	45.72
Solyc12g056860.1.1	Tomato	nucleus	31.74	45.69
TraesCS3A01G372400.2	Wheat	nucleus	52.1	45.55
TraesCS3D01G365200.3	Wheat	nucleus	52.3	45.17
Solyc04g072460.2.1	Tomato	nucleus	31.74	44.04
Solyc10g080410.1.1	Tomato	nucleus	39.72	43.36
Solyc10g078670.1.1	Tomato	nucleus	41.92	43.12
Solyc04g011670.2.1	Tomato	nucleus	31.54	42.25
Solyc04g054320.2.1	Tomato	nucleus	30.74	41.62
Solyc05g009660.2.1	Tomato	nucleus	39.72	41.12
Zm00001d042777_P006	Maize	nucleus	52.49	40.46
GSMUA_Achr11P...	Banana	nucleus	24.15	39.16
HORVU3Hr1G084340.10	Barley	nucleus	37.33	32.86

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827
InterPro:IPR025422	UniProt:K4C9F0	PFAM:PF07716	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179	SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc06g074320.2
EnsemblPlants:Solyc06g074320.2.1	InterPro:TGA_domain	UniParc:UPI00027663C6	InterPro:bZIP	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:45942548..45948182

Molecular Weight (calculated)

55603.3 Da

IEP (calculated)

7.032

GRAVY (calculated)

-0.549

Length

501 amino acids

Sequence
(BLAST)

001: MASQGIGETG LTDSGSSHHN HNMPYAVYRG LNPASTSFMY HSTPNGNQEG AGFDFGELEE AFVLQGFKMS NDEAKASLYA AAATGKPAAT LEMFPSWPMR
101: YQQTPRENSK SREESTDSGS LSSRAQPHFE PESPISRKAS SDHQLQITHK SQEQQQLQDM ASNNNPRTGV LQTELSSKSN SEKKKGAAST SERVLDPKTL
201: RRLAQNREAA KKSRIRKKAY VQQLETSRIR LSQLEQELQR ASSQGIFLGG GTAAGSNISS GAAIFDMEYS RWLDDDHRHI AELRTALQAH LSDGDLRLIV
301: DGYLAHYDEI FSLKGVAAKS DVFHLITGTW TTPAERCFLW MGGFRPSELI KMLIGQLDPL TEQQVVGIYS LQQSSQQAEE ALSQGLEQLQ QSLIDTIATA
401: SLHDGMHHMA LALGKLSNLE GFVRQADNLR QQTLHQLHRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLIADDN SCQTITGLQM VQSSQNHFSN
501: F

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.