Factsheet for Zm00001d052543_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82891	Sorghum	nucleus	94.44	94.06
Zm00001d023424_P001	Maize	nucleus	51.03	80.0
Os11t0152700-01	Rice	nucleus	76.95	77.27
HORVU4Hr1G025130.10	Barley	nucleus	57.0	76.31
Os12t0152900-01	Rice	nucleus	75.31	74.85
TraesCS4D01G129900.1	Wheat	nucleus	73.05	65.99
TraesCS4A01G183400.2	Wheat	nucleus	73.25	65.8
TraesCS4B01G135000.1	Wheat	nucleus	73.25	62.9
PGSC0003DMT400067782	Potato	nucleus	38.07	56.23
Zm00001d022542_P002	Maize	nucleus	38.48	56.16
Solyc11g068370.1.1	Tomato	nucleus	42.39	55.38
PGSC0003DMT400018306	Potato	nucleus	55.56	55.33
GSMUA_Achr2P06770_001	Banana	nucleus	54.32	55.23
Solyc06g074320.2.1	Tomato	nucleus	56.38	54.69
VIT_06s0080g00360.t01	Wine grape	nucleus	55.97	54.4
KRH26635	Soybean	nucleus	53.29	53.07
KRH22685	Soybean	nucleus	52.88	52.45
Bra031622.1-P	Field mustard	nucleus	46.09	52.34
CDY22689	Canola	nucleus	45.88	52.1
Bra018634.1-P	Field mustard	nucleus	50.41	51.58
AT1G08320.4	Thale cress	nucleus	50.62	51.14
KRH30432	Soybean	nucleus	51.65	50.91
CDX95068	Canola	nucleus	49.79	50.63
CDX93571	Canola	nucleus	49.79	50.63
KRH25227	Soybean	nucleus	51.44	49.9
CDY06309	Canola	nucleus	49.59	49.79
Zm00001d010658_P001	Maize	nucleus	33.74	47.54
Zm00001d008225_P001	Maize	nucleus	39.09	45.24
Zm00001d028936_P001	Maize	nucleus	35.8	44.5
Zm00001d016312_P001	Maize	cytosol	8.44	44.09
Zm00001d012294_P009	Maize	nucleus	48.97	42.88
Zm00001d038296_P001	Maize	nucleus	44.86	42.0
Zm00001d015845_P001	Maize	cytosol	23.05	41.64
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	28.81	41.3
Zm00001d037317_P003	Maize	nucleus	35.6	40.05
Zm00001d026398_P006	Maize	nucleus	33.13	39.08
Zm00001d024160_P003	Maize	nucleus	33.95	38.92
Zm00001d043153_P001	Maize	nucleus	33.54	38.63
Zm00001d020938_P002	Maize	nucleus	38.27	38.27
Zm00001d005143_P001	Maize	nucleus	32.3	38.2
Zm00001d012553_P003	Maize	nucleus	36.21	37.45
Zm00001d042777_P006	Maize	nucleus	50.0	37.38
Zm00001d006027_P002	Maize	nucleus	37.86	36.58
Zm00001d002143_P002	Maize	cytosol	31.69	35.08
Zm00001d046751_P001	Maize	nucleus	31.89	33.84
Zm00001d041428_P001	Maize	cytosol	10.7	33.33
Zm00001d015846_P001	Maize	nucleus	11.52	27.72
Zm00001d045823_P001	Maize	cytosol	14.4	23.18

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100383078	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ProteinID:AQK57403.1	ProteinID:AQK57404.1
ProteinID:AQK57406.1	EMBL:BT066129	UniProt:C0PCW0	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827
InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF257	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000189D648
EnsemblPlantsGene:Zm00001d052543	EnsemblPlants:Zm00001d052543_P001	EnsemblPlants:Zm00001d052543_T001	InterPro:bZIP	SEG:seg	:

Description

bZIP-transcription factor 79bZIP transcription factor family protein

Coordinates

chr4:-:192657367..192664588

Molecular Weight (calculated)

52932.2 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.440

Length

486 amino acids

Sequence
(BLAST)

001: MGDTSSSSHS RQDPSLLGYG FHGAIANSTP PANFFDQGGG GTYFGELEEA FMHQVASLRR TQQAATVSAP HHGDTKPFPT AAGATAATAT ATARPPPTLD
101: IFPAWPMRSR LHTPKECSNV TADSTDDSES SSKNHSNHSS DQLGAAAAAN MASQFEQASQ QQLQHKNMAT SSTPRTGKAL DPKVIRRLAQ NREAARKSRL
201: RKKAYIQQLE SCKLKLSQME QDMQRARTQG LFLGGDPGAS TSSGAAMFDV EYARWLDNHS RRLAELNGAL HAHLADGDLR AIVDDALTHH DELFQLKAMA
301: AKSDVFHLIT GVWTTPAERC FLWMGGFRPS DLLKTLLPQL DPLTEQQVVG ICSLQQSSQQ AEEALSQGLE QLHQSLADTM AGGSLTDDAN MSFMSQMALA
401: LGKLANLEGF VIQADNLRQQ TLHQMHRILT VRQAARCLLA IGEYHNRLRA LSSLWASRPR EILVTDEGNC EISIAAQPSQ NQFSTF

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.