Factsheet for Zm00001d023424_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G025130.10	Barley	nucleus	74.84	63.91
KXG22976	Sorghum	nucleus	87.1	55.9
Zm00001d022542_P002	Maize	nucleus	57.1	53.15
Zm00001d052543_P001	Maize	nucleus	80.0	51.03
PGSC0003DMT400067782	Potato	nucleus	53.87	50.76
Os11t0152700-01	Rice	nucleus	77.42	49.59
Solyc11g068370.1.1	Tomato	nucleus	59.35	49.46
Os12t0152900-01	Rice	nucleus	76.77	48.67
Bra031622.1-P	Field mustard	nucleus	61.94	44.86
CDY22689	Canola	nucleus	61.61	44.63
TraesCS4D01G129900.1	Wheat	nucleus	77.1	44.42
TraesCS4A01G183400.2	Wheat	nucleus	77.1	44.18
Zm00001d016312_P001	Maize	cytosol	13.23	44.09
Zm00001d010658_P001	Maize	nucleus	48.06	43.19
TraesCS4B01G135000.1	Wheat	nucleus	76.77	42.05
PGSC0003DMT400018306	Potato	nucleus	65.48	41.6
Solyc06g074320.2.1	Tomato	nucleus	66.13	40.92
Zm00001d008225_P001	Maize	nucleus	55.16	40.71
Zm00001d028936_P001	Maize	nucleus	51.29	40.66
GSMUA_Achr2P06770_001	Banana	nucleus	62.58	40.59
VIT_06s0080g00360.t01	Wine grape	nucleus	64.84	40.2
Bra018634.1-P	Field mustard	nucleus	60.97	39.79
AT1G08320.4	Thale cress	nucleus	61.61	39.71
CDY06309	Canola	nucleus	61.61	39.46
Zm00001d015845_P001	Maize	cytosol	34.19	39.41
CDX95068	Canola	nucleus	60.65	39.33
CDX93571	Canola	nucleus	60.32	39.12
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	42.58	38.94
KRH26635	Soybean	nucleus	59.68	37.91
KRH22685	Soybean	nucleus	59.35	37.55
KRH30432	Soybean	nucleus	59.68	37.53
KRH25227	Soybean	nucleus	60.0	37.13
Zm00001d037317_P003	Maize	nucleus	50.32	36.11
Zm00001d005143_P001	Maize	nucleus	45.81	34.55
Zm00001d038296_P001	Maize	nucleus	57.1	34.1
Zm00001d012294_P009	Maize	nucleus	60.97	34.05
Zm00001d026398_P006	Maize	nucleus	45.16	33.98
Zm00001d024160_P003	Maize	nucleus	46.13	33.73
Zm00001d020938_P002	Maize	nucleus	52.26	33.33
Zm00001d041428_P001	Maize	cytosol	16.45	32.69
Zm00001d043153_P001	Maize	nucleus	43.87	32.23
Zm00001d006027_P002	Maize	nucleus	51.29	31.61
Zm00001d012553_P003	Maize	nucleus	47.42	31.28
Zm00001d002143_P002	Maize	cytosol	42.9	30.3
Zm00001d042777_P006	Maize	nucleus	63.23	30.15
Zm00001d046751_P001	Maize	nucleus	42.9	29.04
Zm00001d045823_P001	Maize	cytosol	17.1	17.55
Zm00001d015846_P001	Maize	nucleus	10.65	16.34

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ProteinID:AQK39302.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR004827	InterPro:IPR025422	UniProt:K7UBS2	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF257	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000221CEDC
EnsemblPlantsGene:Zm00001d023424	EnsemblPlants:Zm00001d023424_P001	EnsemblPlants:Zm00001d023424_T001	InterPro:bZIP	SEG:seg	:

Description

bZIP-transcription factor 109Putative bZIP transcription factor superfamily protein

Coordinates

chr10:-:5180381..5183180

Molecular Weight (calculated)

34379.3 Da

IEP (calculated)

8.350

GRAVY (calculated)

-0.296

Length

310 amino acids

Sequence
(BLAST)

001: MATLGQWRLK HFLTIRRLAQ NREAARKSRL RKKAYIQQLE SSKLKLAQME RDMQRAHSQP QGVFLGGAPG ANASSGAAMI DAEYARWLDD QGQRKAELQG
101: ALQAHLPDGD LQAIVDDTLT HHDELFRLKA SAAKSDVFHV ITGAWTTPAE RCFLWMGGFR PSDLVKTLLP QLDPLTEQQQ LVGICNLKQS SQQAEEALSQ
201: GLDQLHQSLA DTMANGSLID DTSMSFMGQM ALALGKLSSL EVFVIQADNL RQQTLHQMRR ILTVRQAARC FLAIAGYQNR LRALSSLWVS RPREILVADE
301: GDCGEMSAAA

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.