Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93571 | Canola | nucleus | 98.74 | 98.74 |
| Bra018634.1-P | Field mustard | nucleus | 97.28 | 97.89 |
| AT1G08320.4 | Thale cress | nucleus | 92.47 | 91.89 |
| CDY06309 | Canola | nucleus | 91.21 | 90.08 |
| CDY22689 | Canola | nucleus | 79.71 | 89.02 |
| VIT_06s0080g00360.t01 | Wine grape | nucleus | 69.46 | 66.4 |
| Solyc11g068370.1.1 | Tomato | nucleus | 51.26 | 65.86 |
| PGSC0003DMT400067782 | Potato | nucleus | 45.19 | 65.65 |
| PGSC0003DMT400018306 | Potato | nucleus | 65.27 | 63.93 |
| Solyc06g074320.2.1 | Tomato | nucleus | 66.53 | 63.47 |
| KRH26635 | Soybean | nucleus | 63.39 | 62.09 |
| KRH25227 | Soybean | nucleus | 64.44 | 61.48 |
| KRH22685 | Soybean | nucleus | 62.76 | 61.22 |
| KRH30432 | Soybean | nucleus | 62.55 | 60.65 |
| Zm00001d023424_P001 | Maize | nucleus | 39.33 | 60.65 |
| GSMUA_Achr11P... | Banana | cytosol | 28.87 | 57.02 |
| CDX70053 | Canola | nucleus | 38.91 | 56.88 |
| CDX98971 | Canola | nucleus | 38.91 | 56.71 |
| HORVU4Hr1G025130.10 | Barley | nucleus | 42.89 | 56.47 |
| CDY08443 | Canola | nucleus | 38.91 | 56.19 |
| CDX73830 | Canola | nucleus | 38.49 | 55.59 |
| CDY00762 | Canola | nucleus | 38.49 | 55.59 |
| CDY50562 | Canola | nucleus | 38.49 | 55.09 |
| CDY52616 | Canola | nucleus | 38.28 | 54.95 |
| CDY14061 | Canola | nucleus | 37.45 | 54.91 |
| CDY05010 | Canola | nucleus | 37.24 | 54.6 |
| CDY71150 | Canola | nucleus, plastid | 21.97 | 53.03 |
| GSMUA_Achr2P06770_001 | Banana | nucleus | 51.67 | 51.67 |
| GSMUA_Achr11P... | Banana | nucleus | 52.51 | 51.02 |
| GSMUA_Achr10P... | Banana | nucleus | 50.21 | 50.85 |
| GSMUA_Achr5P26200_001 | Banana | nucleus | 43.1 | 50.74 |
| CDY70396 | Canola | mitochondrion | 22.18 | 50.72 |
| KXG22976 | Sorghum | nucleus | 50.63 | 50.1 |
| Zm00001d052543_P001 | Maize | nucleus | 50.63 | 49.79 |
| OQU82891 | Sorghum | nucleus | 50.63 | 49.59 |
| Os12t0152900-01 | Rice | nucleus | 50.21 | 49.08 |
| CDY42138 | Canola | nucleus | 33.05 | 48.77 |
| Os05t0443900-01 | Rice | nucleus | 48.95 | 48.35 |
| Os11t0152700-01 | Rice | nucleus | 48.54 | 47.93 |
| Os01t0859500-01 | Rice | nucleus | 52.51 | 46.57 |
| KXG33735 | Sorghum | nucleus | 51.88 | 46.53 |
| CDY41495 | Canola | nucleus | 34.94 | 45.26 |
| GSMUA_Achr3P22700_001 | Banana | nucleus | 47.91 | 45.26 |
| CDY38253 | Canola | nucleus | 36.4 | 45.19 |
| CDY38843 | Canola | nucleus | 34.94 | 45.14 |
| CDX68037 | Canola | nucleus | 34.94 | 45.01 |
| CDY70714 | Canola | nucleus | 33.05 | 44.89 |
| HORVU1Hr1G073870.2 | Barley | nucleus | 48.33 | 44.17 |
| Zm00001d012294_P009 | Maize | nucleus | 51.26 | 44.14 |
| TraesCS1B01G285800.1 | Wheat | nucleus | 48.33 | 43.92 |
| OQU78097 | Sorghum | nucleus | 47.91 | 43.87 |
| TraesCS3B01G404800.2 | Wheat | nucleus | 52.51 | 43.8 |
| TraesCS3A01G372400.2 | Wheat | nucleus | 52.3 | 43.63 |
| TraesCS1A01G276600.2 | Wheat | nucleus | 47.91 | 43.54 |
| TraesCS1D01G276100.2 | Wheat | nucleus | 47.91 | 43.54 |
| TraesCS4D01G129900.1 | Wheat | nucleus | 48.95 | 43.49 |
| CDX70061 | Canola | nucleus | 41.0 | 43.46 |
| TraesCS3D01G365200.3 | Wheat | nucleus | 52.72 | 43.45 |
| CDY08810 | Canola | nucleus | 33.26 | 43.32 |
| TraesCS4A01G183400.2 | Wheat | nucleus | 48.95 | 43.25 |
| Zm00001d038296_P001 | Maize | nucleus | 46.86 | 43.16 |
| CDY70235 | Canola | nucleus | 32.85 | 43.13 |
| CDX98963 | Canola | nucleus | 40.59 | 43.02 |
| CDX85782 | Canola | nucleus | 32.43 | 42.82 |
| CDY40074 | Canola | nucleus | 32.22 | 42.54 |
| CDY21336 | Canola | nucleus | 37.03 | 42.34 |
| CDY14552 | Canola | nucleus | 32.22 | 41.96 |
| CDY33975 | Canola | nucleus | 32.43 | 41.89 |
| CDY37811 | Canola | nucleus | 32.43 | 41.89 |
| TraesCS4B01G135000.1 | Wheat | nucleus | 49.16 | 41.52 |
| CDX69866 | Canola | nucleus | 31.17 | 40.93 |
| CDY21625 | Canola | nucleus | 30.75 | 40.38 |
| CDX95999 | Canola | nucleus | 37.24 | 40.27 |
| CDY38608 | Canola | nucleus | 37.24 | 40.27 |
| CDY18683 | Canola | cytosol | 31.17 | 40.05 |
| CDX81273 | Canola | nucleus | 32.43 | 39.85 |
| CDX88399 | Canola | nucleus | 34.94 | 38.84 |
| Zm00001d042777_P006 | Maize | nucleus | 52.72 | 38.77 |
| CDX87494 | Canola | nucleus | 34.94 | 37.61 |
| GSMUA_Achr11P... | Banana | nucleus | 21.97 | 33.98 |
| HORVU3Hr1G084340.10 | Barley | nucleus | 37.45 | 31.46 |
| CDY00417 | Canola | mitochondrion | 14.64 | 30.17 |
| CDX79240 | Canola | nucleus | 30.54 | 25.61 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078E6V0 | EnsemblPlants:CDX95068 | ProteinID:CDX95068 |
| ProteinID:CDX95068.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00100588001 | InterPro:IPR004827 | InterPro:IPR025422 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF179 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE4914 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g06030D
Coordinates
chrLK031886:+:954989..960182
Molecular Weight (calculated)
53238.1 Da
IEP (calculated)
7.759
GRAVY (calculated)
-0.543
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNHNHSHH LSYSLLHGLS NNPPPPGFIN QDGSSSFDFG ELEEAIVLQG VKYRNDETKP PLFAGGGGAT TLEMFPSWPI RTHQTLPTEE SSKSEGESTD
101: SGSANFSGKA ESQQPESPMS NKQNHQLMLQ HQRNNNMGNS TSTSGLPSTS RTPAPPKASE DKRKATTSGK LLDAKTLRRL AQNREAARKS RLRKKAYVQQ
201: LESSRIKLSQ LEQELQRARS QGMFIGGCGP PGPNITSGAA IFDMEYGRWL EEDNRHMSEI RTGLQAHLSD NDLRLIVDGY IAHFDEVLRL KAVAAKADVF
301: HLIIGTWMSP AERCFIWMAG FRPSDLIKIL VSQMDLLTEQ QLMGIYSLQH SSQQAEEALS QGLEQLQQSL IDTLAASPVM DGMQQMAVAL GKISNLEGFI
401: RQADNLRQQT VHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWLSRPRE TLISDETSCQ TTTDLQMVQS SRNHFSNF
101: SGSANFSGKA ESQQPESPMS NKQNHQLMLQ HQRNNNMGNS TSTSGLPSTS RTPAPPKASE DKRKATTSGK LLDAKTLRRL AQNREAARKS RLRKKAYVQQ
201: LESSRIKLSQ LEQELQRARS QGMFIGGCGP PGPNITSGAA IFDMEYGRWL EEDNRHMSEI RTGLQAHLSD NDLRLIVDGY IAHFDEVLRL KAVAAKADVF
301: HLIIGTWMSP AERCFIWMAG FRPSDLIKIL VSQMDLLTEQ QLMGIYSLQH SSQQAEEALS QGLEQLQQSL IDTLAASPVM DGMQQMAVAL GKISNLEGFI
401: RQADNLRQQT VHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWLSRPRE TLISDETSCQ TTTDLQMVQS SRNHFSNF
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.