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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70396 Canola mitochondrion 74.24 70.33
CDY70235 Canola nucleus 96.46 52.47
CDY70714 Canola nucleus 75.76 42.61
CDX98963 Canola nucleus 93.94 41.24
CDX70061 Canola nucleus 93.94 41.24
AT5G06839.3 Thale cress nucleus 89.39 38.48
PGSC0003DMT400029743 Potato nucleus, plastid 63.64 33.16
GSMUA_Achr9P27700_001 Banana nucleus 60.1 31.73
GSMUA_Achr3P11150_001 Banana nucleus 64.14 30.68
CDY42138 Canola nucleus 48.99 29.94
CDY08443 Canola nucleus 49.49 29.61
CDY14061 Canola nucleus 47.98 29.14
CDY05010 Canola nucleus 47.98 29.14
CDX98971 Canola nucleus 47.98 28.96
CDX70053 Canola nucleus 47.47 28.75
CDY50562 Canola nucleus 47.98 28.44
CDY52616 Canola nucleus 47.47 28.23
Solyc10g080410.1.1 Tomato nucleus 65.15 28.1
CDX73830 Canola nucleus 46.97 28.1
CDY00762 Canola nucleus 46.97 28.1
VIT_08s0007g06160.t01 Wine grape nucleus 68.69 27.7
KRG95350 Soybean nucleus 68.18 27.49
KRH67029 Soybean nucleus 68.18 27.49
KRH71904 Soybean nucleus 67.17 27.48
PGSC0003DMT400060865 Potato nucleus 63.64 27.33
Solyc10g078670.1.1 Tomato nucleus 63.64 25.87
KRH32997 Soybean nucleus 66.67 25.53
CDY22689 Canola nucleus 53.03 24.53
CDY41495 Canola nucleus 45.45 24.39
CDY38843 Canola nucleus 45.45 24.32
Zm00001d020938_P002 Maize nucleus 59.09 24.07
CDX68037 Canola nucleus 44.95 23.99
CDY38253 Canola nucleus 45.96 23.64
CDY40074 Canola nucleus 42.93 23.48
CDX85782 Canola nucleus 42.93 23.48
KXG35912 Sorghum nucleus 59.09 23.4
GSMUA_Achr9P20200_001 Banana plastid 63.64 23.03
CDY08810 Canola nucleus 42.42 22.89
Zm00001d006027_P002 Maize nucleus 58.08 22.86
CDY00417 Canola mitochondrion 26.77 22.84
CDX69866 Canola nucleus 41.92 22.8
CDY21625 Canola nucleus 41.41 22.53
TraesCS5A01G265600.1 Wheat nucleus 58.59 22.39
TraesCS5D01G273500.1 Wheat nucleus 58.08 22.2
CDY14552 Canola nucleus 40.91 22.07
CDY21336 Canola nucleus 46.46 22.01
CDX95068 Canola nucleus 53.03 21.97
TraesCS5B01G265300.1 Wheat nucleus 58.08 21.86
CDX93571 Canola nucleus 52.53 21.76
Os09t0489500-02 Rice nucleus 57.07 21.61
CDY06309 Canola nucleus 52.53 21.49
CDY37811 Canola nucleus 39.9 21.35
CDY33975 Canola nucleus 39.9 21.35
CDX81273 Canola nucleus 41.92 21.34
CDY18683 Canola cytosol 38.89 20.7
HORVU5Hr1G073410.1 Barley nucleus 58.59 20.46
CDX88399 Canola nucleus 43.94 20.23
CDX95999 Canola nucleus 44.95 20.14
CDY38608 Canola nucleus 44.95 20.14
CDX87494 Canola nucleus 44.95 20.05
CDX79240 Canola nucleus 43.43 15.09
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1MapMan:15.5.4.7.1GO:A0A078JXI4UniProt:A0A078JXI4EnsemblPlants:CDY71150
ProteinID:CDY71150ProteinID:CDY71150.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:GSBRNA2T00011750001InterPro:IPR004827
InterPro:IPR025422PFAM:PF07716PFAM:PF14144ScanProsite:PS00036PFscan:PS51806PANTHER:PTHR22952
PANTHER:PTHR22952:SF241SMART:SM00338SUPFAM:SSF57959InterPro:TGA_domainUniParc:UPI0004EF046FInterPro:bZIP
SEG:seg:::::
Description
BnaAnng36310DBnaAnng36310D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXI4]
Coordinates
chrLK044685:+:3..1549
Molecular Weight (calculated)
22874.6 Da
IEP (calculated)
9.085
GRAVY (calculated)
-0.466
Length
198 amino acids
Sequence
(BLAST)
001: YESYMAENLA MRPPTSTLNI FPSKPMHIEP PPSSSTPNTL RRLAQNREAA RKSRLRKKAY VQQLESCRIK LTQLEQEIQR ARSQQGGMPI GPGYTSSEAA
101: VFDMEYTRWL EEQQRLLTEL RVATQEHLAE NELRMFVDTC LAHYDHLINL KAMVAKTDVF HLISGAWKTP AERCFLWMGG FRPSEIIKVH ILSYSYTI
Best Arabidopsis Sequence Match ( AT1G08320.2 )
(BLAST)
001: MSSKHHLMLQ PHHNNMANSS STSGLPSTSR TLAPPKPSED KRKATTSGKQ LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ
101: GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF
201: RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR
301: QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS RNHFSNF
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.