Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08443 | Canola | nucleus | 86.73 | 84.89 |
| CDX73830 | Canola | nucleus | 83.95 | 82.18 |
| CDY00762 | Canola | nucleus | 83.33 | 81.57 |
| CDY50562 | Canola | nucleus | 83.95 | 81.44 |
| CDY52616 | Canola | nucleus | 83.02 | 80.78 |
| AT3G12250.4 | Thale cress | nucleus | 86.11 | 78.59 |
| CDX70053 | Canola | nucleus | 78.4 | 77.68 |
| CDX98971 | Canola | nucleus | 78.4 | 77.44 |
| CDY14061 | Canola | nucleus | 70.99 | 70.55 |
| CDY05010 | Canola | nucleus | 70.68 | 70.25 |
| Os01t0279900-01 | Rice | nucleus | 70.37 | 69.3 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 70.99 | 69.28 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 70.68 | 68.98 |
| KRH36324 | Soybean | nucleus | 70.68 | 68.98 |
| Solyc11g064950.1.1 | Tomato | nucleus | 68.21 | 68.21 |
| PGSC0003DMT400024428 | Potato | nucleus | 68.21 | 68.21 |
| EES02530 | Sorghum | nucleus | 67.59 | 66.36 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 67.9 | 66.27 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 67.9 | 66.27 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 67.59 | 66.16 |
| Solyc01g008730.2.1 | Tomato | nucleus | 66.36 | 65.75 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 67.28 | 65.66 |
| KXG39494 | Sorghum | nucleus | 66.67 | 64.48 |
| Os07t0687700-01 | Rice | nucleus | 66.36 | 64.37 |
| KXG36997 | Sorghum | nucleus | 66.05 | 64.26 |
| Os03t0318600-01 | Rice | nucleus | 65.74 | 63.96 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 66.05 | 63.69 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 66.05 | 63.69 |
| Zm00001d022542_P002 | Maize | nucleus | 65.43 | 63.66 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 65.74 | 63.39 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 65.12 | 62.99 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 65.12 | 62.99 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 64.81 | 62.87 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 64.81 | 62.87 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 62.96 | 60.53 |
| KXG22247 | Sorghum | nucleus | 57.1 | 55.72 |
| Os05t0492000-00 | Rice | nucleus | 54.94 | 53.94 |
| Zm00001d008225_P001 | Maize | nucleus | 67.59 | 52.14 |
| KRG93068 | Soybean | nucleus | 70.37 | 51.35 |
| Zm00001d010658_P001 | Maize | nucleus | 54.63 | 51.3 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 27.47 | 50.57 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 72.22 | 49.89 |
| Zm00001d043153_P001 | Maize | nucleus | 64.51 | 49.53 |
| GSMUA_Achr10P... | Banana | nucleus | 69.44 | 49.23 |
| Zm00001d028936_P001 | Maize | nucleus | 59.26 | 49.1 |
| CDY71150 | Canola | nucleus, plastid | 29.94 | 48.99 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 50.62 | 48.96 |
| KRH20680 | Soybean | nucleus | 70.06 | 48.4 |
| CDY70396 | Canola | mitochondrion | 31.17 | 48.33 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 50.31 | 47.94 |
| GSMUA_Achr11P... | Banana | nucleus | 70.37 | 47.7 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 49.69 | 47.49 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 21.6 | 46.98 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 69.14 | 46.96 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 68.83 | 46.95 |
| EES03778 | Sorghum | nucleus | 67.28 | 46.58 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 68.21 | 46.33 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 67.9 | 46.12 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 48.15 | 45.48 |
| Zm00001d012553_P003 | Maize | nucleus | 65.74 | 45.32 |
| KRH13334 | Soybean | nucleus | 68.83 | 44.87 |
| Os01t0808100-01 | Rice | nucleus | 48.15 | 42.86 |
| CDX69866 | Canola | nucleus | 45.68 | 40.66 |
| CDY70714 | Canola | nucleus | 43.83 | 40.34 |
| CDY70235 | Canola | nucleus | 45.06 | 40.11 |
| CDX85782 | Canola | nucleus | 44.75 | 40.06 |
| CDY08810 | Canola | nucleus | 45.37 | 40.05 |
| CDX95999 | Canola | nucleus | 54.63 | 40.05 |
| CDY38608 | Canola | nucleus | 54.63 | 40.05 |
| CDY21625 | Canola | nucleus | 44.75 | 39.84 |
| CDY40074 | Canola | nucleus | 44.44 | 39.78 |
| CDY14552 | Canola | nucleus | 44.75 | 39.51 |
| CDX68037 | Canola | nucleus | 44.14 | 38.54 |
| CDY33975 | Canola | nucleus | 43.52 | 38.11 |
| CDY37811 | Canola | nucleus | 43.52 | 38.11 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 40.74 | 37.61 |
| CDY41495 | Canola | nucleus | 42.28 | 37.13 |
| CDY38253 | Canola | nucleus | 43.21 | 36.36 |
| CDY38843 | Canola | nucleus | 41.36 | 36.22 |
| CDY22689 | Canola | nucleus | 47.53 | 35.98 |
| CDY18683 | Canola | cytosol | 41.05 | 35.75 |
| CDX81273 | Canola | nucleus | 42.9 | 35.73 |
| CDX88399 | Canola | nucleus | 45.37 | 34.19 |
| CDX87494 | Canola | nucleus | 46.6 | 34.01 |
| CDY21336 | Canola | nucleus | 43.21 | 33.49 |
| CDX95068 | Canola | nucleus | 48.77 | 33.05 |
| CDX70061 | Canola | nucleus | 45.68 | 32.82 |
| CDX98963 | Canola | nucleus | 45.37 | 32.59 |
| CDX93571 | Canola | nucleus | 47.84 | 32.43 |
| CDY06309 | Canola | nucleus | 47.53 | 31.82 |
| CDY00417 | Canola | mitochondrion | 19.75 | 27.59 |
| CDX79240 | Canola | nucleus | 43.52 | 24.74 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | GO:A0A078HZG7 | UniProt:A0A078HZG7 |
| EnsemblPlants:CDY42138 | ProteinID:CDY42138 | ProteinID:CDY42138.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00074319001 |
| InterPro:IPR004827 | InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain |
| UniParc:UPI0004EE0D9C | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC05g40810DBnaC05g40810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZG7]
Coordinates
chrLK032516:+:67985..70933
Molecular Weight (calculated)
36052.4 Da
IEP (calculated)
6.068
GRAVY (calculated)
-0.574
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTSSRTDA STDGDTDPRD LGSFYNLYSV IRGRLEPGFP WDILPSERGQ VMLAGASDSS DRSKDKLDQK TLRRLAQNRE AARKSRLRKK AYVQQLENSR
101: LKLTQLEQEL QRARQQGVFI SSSGDQAHST GGNGALAFDA EYSRWLEEKN RQMNELRSAL NAHAGDTELR TIVDGVMAHY EELFRIKSNA AKNDVFHILS
201: GMWKTPAERC FLWLGGFRSS ELLKLLANQL EPMTERQVLG INSLQQTSQQ AEDALSQGME SLQQSLAETL SSGTLGSCSS DNVASYMGQM AMAMGQLGTL
301: EGFIRQVHLE CYGTTQSGCV VYRE
101: LKLTQLEQEL QRARQQGVFI SSSGDQAHST GGNGALAFDA EYSRWLEEKN RQMNELRSAL NAHAGDTELR TIVDGVMAHY EELFRIKSNA AKNDVFHILS
201: GMWKTPAERC FLWLGGFRSS ELLKLLANQL EPMTERQVLG INSLQQTSQQ AEDALSQGME SLQQSLAETL SSGTLGSCSS DNVASYMGQM AMAMGQLGTL
301: EGFIRQVHLE CYGTTQSGCV VYRE
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.