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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 6
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G042830.1 Barley cytosol, mitochondrion, nucleus, plastid 64.2 75.84
PGSC0003DMT400024428 Potato nucleus 81.25 44.14
Solyc11g064950.1.1 Tomato nucleus 81.25 44.14
GSMUA_Achr8P05800_001 Banana nucleus 76.7 40.66
Os01t0279900-01 Rice nucleus 75.0 40.12
KRH36324 Soybean nucleus 75.57 40.06
Os03t0318600-01 Rice nucleus 75.57 39.94
KXG39494 Sorghum nucleus 75.57 39.7
GSMUA_Achr3P25020_001 Banana nucleus 74.43 39.46
EES02530 Sorghum nucleus 73.86 39.39
Bra009241.1-P Field mustard nucleus 69.32 39.35
KXG36997 Sorghum nucleus 74.43 39.34
HORVU3Hr1G042790.4 Barley nucleus 73.86 39.27
TraesCS3A01G190700.2 Wheat nucleus 73.86 39.16
TraesCS3B01G220400.2 Wheat nucleus 73.86 39.16
TraesCS3D01G194800.2 Wheat nucleus 73.86 39.16
HORVU4Hr1G052330.3 Barley nucleus 73.86 38.92
TraesCS4B01G178600.1 Wheat nucleus 73.86 38.92
PGSC0003DMT400060922 Potato nucleus 59.09 38.81
TraesCS4A01G126300.2 Wheat nucleus 73.86 38.81
TraesCS4D01G180200.4 Wheat nucleus 73.86 38.81
AT5G06950.5 Thale cress nucleus 72.73 38.79
Zm00001d022542_P002 Maize nucleus 73.3 38.74
TraesCS2B01G113200.2 Wheat nucleus 73.3 38.39
TraesCS2D01G096800.2 Wheat nucleus 73.3 38.39
TraesCS2A01G097500.2 Wheat nucleus 73.3 38.39
CDY08443 Canola nucleus 72.16 38.37
Os07t0687700-01 Rice nucleus 72.73 38.32
Bra034767.1-P Field mustard nucleus 71.59 38.07
HORVU2Hr1G016580.5 Barley nucleus 72.73 37.98
CDX70053 Canola nucleus 70.45 37.92
CDX98971 Canola nucleus 70.45 37.8
AT5G06960.1 Thale cress nucleus 70.45 37.58
Bra028713.1-P Field mustard nucleus 68.75 37.12
CDY14061 Canola nucleus 68.75 37.12
CDY52616 Canola nucleus 69.89 36.94
CDY50562 Canola nucleus 69.89 36.83
Bra038705.1-P Field mustard nucleus 69.89 36.83
CDY05010 Canola nucleus 68.18 36.81
CDX73830 Canola nucleus 68.18 36.25
CDY00762 Canola nucleus 68.18 36.25
Bra001443.1-P Field mustard nucleus 68.18 36.25
AT3G12250.4 Thale cress nucleus 70.45 34.93
KXG22247 Sorghum nucleus 61.36 32.53
Zm00001d028936_P001 Maize nucleus 71.59 32.23
Zm00001d008225_P001 Maize nucleus 73.86 30.95
KRG93068 Soybean nucleus 76.14 30.18
PGSC0003DMT400060926 Potato nucleus 73.3 29.79
VIT_13s0084g00660.t01 Wine grape nucleus 78.98 29.64
GSMUA_Achr10P... Banana nucleus 76.14 29.32
Os05t0492000-00 Rice nucleus 54.55 29.09
GSMUA_Achr11P... Banana nucleus 77.27 28.45
KRH20680 Soybean nucleus 74.43 27.93
HORVU3Hr1G079010.5 Barley nucleus 75.57 27.88
TraesCS3B01G365100.1 Wheat nucleus 75.57 27.88
EES03778 Sorghum nucleus 73.86 27.78
TraesCS3D01G327600.1 Wheat nucleus 75.0 27.67
TraesCS3A01G334100.1 Wheat nucleus 74.43 27.58
CDY42138 Canola nucleus 50.57 27.47
Zm00001d010658_P001 Maize nucleus 53.41 27.25
KRH13334 Soybean nucleus 75.57 26.76
TraesCS1B01G127400.1 Wheat nucleus 49.43 25.59
PGSC0003DMT400067782 Potato nucleus 47.73 25.53
TraesCS1A01G096300.1 Wheat nucleus 48.3 25.37
TraesCS1D01G105300.1 Wheat nucleus 48.3 25.07
PGSC0003DMT400029743 Potato nucleus, plastid 51.14 23.68
PGSC0003DMT400033741 Potato nucleus 64.2 23.4
HORVU1Hr1G068220.1 Barley nucleus 44.89 23.03
PGSC0003DMT400070884 Potato nucleus 47.16 22.99
PGSC0003DMT400043651 Potato nucleus 46.59 22.71
PGSC0003DMT400033308 Potato nucleus 45.45 22.47
PGSC0003DMT400016235 Potato nucleus 47.16 21.17
Zm00001d043153_P001 Maize nucleus 50.57 21.09
Zm00001d012553_P003 Maize nucleus 53.98 20.21
PGSC0003DMT400018306 Potato nucleus 55.11 19.88
PGSC0003DMT400060865 Potato nucleus 48.86 18.66
HORVU0Hr1G032230.4 Barley nucleus 24.43 12.25
Os01t0808100-01 Rice nucleus 14.2 6.87
Protein Annotations
EntrezGene:102578656MapMan:15.5.4.7.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0006351GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0043565InterPro:IPR025422UniProt:M1ANM4EnsemblPlantsGene:PGSC0003DMG400010322PGSC:PGSC0003DMG400010322EnsemblPlants:PGSC0003DMT400026710
PFscan:PS51806PANTHER:PTHR22952PANTHER:PTHR22952:SF244InterPro:TGA_domainUniParc:UPI00029628D0RefSeq:XP_006351694.1
SEG:seg:::::
Description
BZIP transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400010322]
Coordinates
chr9:-:50164959..50167490
Molecular Weight (calculated)
18939.9 Da
IEP (calculated)
11.895
GRAVY (calculated)
-0.222
Length
176 amino acids
Sequence
(BLAST)
001: MAPPGLRRSS RHGASGARGV LEAWRLGASG GSSRHGVSRA LGALRRLLIN QLEPLTEQQL LAINNLQQSS QQAEDALSQG IKVLQQSLAE TLAGSLGPSG
101: SSGNVANYMG QMAMAMGKLG TLEGFIRQAD NLRQQTLQQM HHILTTRQSA RALLAITDYF SRLRALSSLW LARPLE
Best Arabidopsis Sequence Match ( AT5G06950.1 )
(BLAST)
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Arabidopsis Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.