Factsheet for Bra009241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70053	Canola	nucleus	99.03	93.88
CDX98971	Canola	nucleus	99.03	93.6
AT5G06950.5	Thale cress	nucleus	93.87	88.18
Bra001443.1-P	Field mustard	nucleus	91.94	86.1
Bra034767.1-P	Field mustard	nucleus	91.61	85.8
Bra038705.1-P	Field mustard	nucleus	91.29	84.73
Bra028713.1-P	Field mustard	nucleus	81.29	77.3
PGSC0003DMT400024428	Potato	nucleus	78.06	74.69
Solyc11g064950.1.1	Tomato	nucleus	78.06	74.69
Os01t0279900-01	Rice	nucleus	78.39	73.86
GSMUA_Achr3P25020_001	Banana	nucleus	78.71	73.49
KRH36324	Soybean	nucleus	78.39	73.19
GSMUA_Achr8P05800_001	Banana	nucleus	78.39	73.19
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	35.16	73.15
HORVU3Hr1G042790.4	Barley	nucleus	76.45	71.6
EES02530	Sorghum	nucleus	76.13	71.52
TraesCS3A01G190700.2	Wheat	nucleus	76.45	71.39
TraesCS3B01G220400.2	Wheat	nucleus	76.45	71.39
Solyc01g008730.2.1	Tomato	nucleus	74.84	70.95
TraesCS3D01G194800.2	Wheat	nucleus	75.81	70.78
Os07t0687700-01	Rice	nucleus	76.13	70.66
KXG39494	Sorghum	nucleus	75.48	69.85
KXG36997	Sorghum	nucleus	74.52	69.37
PGSC0003DMT400026710	Potato	mitochondrion	39.35	69.32
TraesCS4B01G178600.1	Wheat	nucleus	74.52	69.16
HORVU4Hr1G052330.3	Barley	nucleus	74.52	69.16
Os03t0318600-01	Rice	nucleus	74.19	69.07
TraesCS4A01G126300.2	Wheat	nucleus	74.52	68.96
TraesCS4D01G180200.4	Wheat	nucleus	74.52	68.96
Zm00001d022542_P002	Maize	nucleus	73.87	68.77
TraesCS2D01G096800.2	Wheat	nucleus	73.87	68.15
TraesCS2B01G113200.2	Wheat	nucleus	73.87	68.15
HORVU2Hr1G016580.5	Barley	nucleus	73.87	67.95
TraesCS2A01G097500.2	Wheat	nucleus	73.55	67.86
KXG22247	Sorghum	nucleus	64.52	60.24
Os05t0492000-00	Rice	nucleus	62.58	58.79
Zm00001d008225_P001	Maize	nucleus	76.13	56.19
Zm00001d010658_P001	Maize	nucleus	62.26	55.94
KRG93068	Soybean	nucleus	78.39	54.73
Zm00001d028936_P001	Maize	nucleus	68.06	53.96
VIT_13s0084g00660.t01	Wine grape	nucleus	80.65	53.3
TraesCS1A01G096300.1	Wheat	nucleus	57.42	53.13
KRH20680	Soybean	nucleus	79.03	52.24
GSMUA_Achr10P...	Banana	nucleus	76.77	52.08
TraesCS1B01G127400.1	Wheat	nucleus	57.1	52.06
TraesCS1D01G105300.1	Wheat	nucleus	56.45	51.62
EES03778	Sorghum	nucleus	77.42	51.28
GSMUA_Achr11P...	Banana	nucleus	79.03	51.26
TraesCS3A01G334100.1	Wheat	nucleus	77.42	50.53
HORVU3Hr1G079010.5	Barley	nucleus	77.74	50.52
TraesCS3D01G327600.1	Wheat	nucleus	76.77	49.9
TraesCS3B01G365100.1	Wheat	nucleus	76.45	49.69
KRH13334	Soybean	nucleus	78.06	48.69
Bra015646.1-P	Field mustard	nucleus	52.9	48.38
HORVU1Hr1G068220.1	Barley	nucleus	52.9	47.81
Bra009233.1-P	Field mustard	cytosol	42.26	46.79
Zm00001d043153_P001	Maize	nucleus	61.61	45.26
Bra009063.1-P	Field mustard	nucleus	52.9	45.05
Bra028604.1-P	Field mustard	nucleus	52.26	44.75
Bra024366.1-P	Field mustard	nucleus	52.9	44.69
Bra016389.1-P	Field mustard	nucleus	52.9	44.57
Bra031364.1-P	Field mustard	nucleus	53.87	44.18
Bra031871.1-P	Field mustard	nucleus	52.26	43.78
Zm00001d012553_P003	Maize	nucleus	65.81	43.4
Bra004329.1-P	Field mustard	nucleus	61.61	43.31
Bra031622.1-P	Field mustard	nucleus	59.03	42.76
Bra037809.1-P	Field mustard	nucleus	49.68	39.29
Bra018634.1-P	Field mustard	nucleus	59.03	38.53
Os01t0808100-01	Rice	nucleus	44.19	37.64
HORVU0Hr1G032230.4	Barley	nucleus	42.58	37.61
Bra005914.1-P	Field mustard	nucleus	48.06	34.33
Bra037374.1-P	Field mustard	nucleus	34.19	33.76

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	MapMan:26.8.3.1.2	EnsemblPlantsGene:Bra009241	EnsemblPlants:Bra009241.1
EnsemblPlants:Bra009241.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0045892	GO:GO:0045893	InterPro:IPR004827	InterPro:IPR025422
UniProt:M4CYE4	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF244	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0002545398
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT5G06950 (E=3e-137) AHBP-1B, TGA2 | AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor

Coordinates

chrA10:+:15782998..15784432

Molecular Weight (calculated)

34642.4 Da

IEP (calculated)

10.054

GRAVY (calculated)

-0.493

Length

310 amino acids

Sequence
(BLAST)

001: MQSEGALVNT AASDSSERSK NKLDQKTVRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG DQAHSTGGNG ALAFDAEYSR
101: WLEEKNKRMN ELRSALNAHA GDGELLIIVD GVMAHYEELF RIKSNAAKND VFHLLYGMWK TPAERCFLWL GGFRSSEILK LLVNQLEPMT ERQVMGINSL
201: QETSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT RQSARALLAI HDYSSRLRAL
301: SSLWLARPRE

Best Arabidopsis Sequence Match ( AT5G06950.2 )
(BLAST)

001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE

Arabidopsis Description

TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.