Factsheet for Bra009233.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70061	Canola	nucleus	98.21	60.98
Bra005914.1-P	Field mustard	nucleus	93.57	60.37
AT5G06839.3	Thale cress	nucleus	93.93	57.17
PGSC0003DMT400029743	Potato	nucleus, plastid	64.64	47.63
GSMUA_Achr9P27700_001	Banana	nucleus	58.93	44.0
Bra009241.1-P	Field mustard	nucleus	46.79	42.26
GSMUA_Achr3P11150_001	Banana	nucleus	61.79	41.79
Bra028713.1-P	Field mustard	nucleus	47.5	40.8
KRH67029	Soybean	nucleus	70.0	39.92
Bra034767.1-P	Field mustard	nucleus	47.14	39.88
VIT_08s0007g06160.t01	Wine grape	nucleus	69.64	39.71
KRG95350	Soybean	nucleus	69.29	39.51
Bra001443.1-P	Field mustard	nucleus	45.71	38.67
Bra038705.1-P	Field mustard	nucleus	45.71	38.32
KRH71904	Soybean	nucleus	66.07	38.22
PGSC0003DMT400060865	Potato	nucleus	60.36	36.66
Solyc10g078670.1.1	Tomato	nucleus	63.57	36.55
Solyc10g080410.1.1	Tomato	nucleus	59.64	36.38
KRH32997	Soybean	nucleus	66.07	35.78
Bra015646.1-P	Field mustard	nucleus	42.14	34.81
Bra031364.1-P	Field mustard	nucleus	44.64	33.07
Bra016389.1-P	Field mustard	nucleus	43.21	32.88
Zm00001d020938_P002	Maize	nucleus	56.07	32.3
KXG35912	Sorghum	nucleus	55.71	31.2
Bra031622.1-P	Field mustard	nucleus	46.79	30.61
Bra028604.1-P	Field mustard	nucleus	38.57	29.83
GSMUA_Achr9P20200_001	Banana	plastid	57.86	29.62
Os09t0489500-02	Rice	nucleus	55.0	29.45
Zm00001d006027_P002	Maize	nucleus	52.86	29.42
Bra009063.1-P	Field mustard	nucleus	37.5	28.85
Bra024366.1-P	Field mustard	nucleus	37.5	28.61
TraesCS5D01G273500.1	Wheat	nucleus	52.86	28.57
TraesCS5A01G265600.1	Wheat	nucleus	52.86	28.57
TraesCS5B01G265300.1	Wheat	nucleus	53.21	28.33
Bra031871.1-P	Field mustard	nucleus	37.14	28.11
Bra018634.1-P	Field mustard	nucleus	47.14	27.79
Bra004329.1-P	Field mustard	nucleus	43.21	27.44
HORVU5Hr1G073410.1	Barley	nucleus	53.57	26.45
Bra037809.1-P	Field mustard	nucleus	36.43	26.02
Bra037374.1-P	Field mustard	nucleus	21.79	19.43

Protein Annotations

MapMan:15.5.4.7.1	EnsemblPlantsGene:Bra009233	EnsemblPlants:Bra009233.1	EnsemblPlants:Bra009233.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4CYD6	PFAM:PF14144
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF241	InterPro:TGA_domain	UniParc:UPI0002545392	SEG:seg

Description

AT5G06839 (E=1e-121) | bZIP family transcription factor

Coordinates

chrA10:+:15754651..15759187

Molecular Weight (calculated)

31209.2 Da

IEP (calculated)

5.942

GRAVY (calculated)

-0.265

Length

280 amino acids

Sequence
(BLAST)

001: MLWQKEGNRK GLASSDHDTP KSSDPKGVFY GGSLIGGDQQ QGGMPIGPGY TSSAEAAVFD MEYTRWLEEQ QRLLTELRVA TQEHLAENEL RMFVDTCLAH
101: YDHLINLKAM VAKTDVFHLI SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTH EAEEALSQGL EALNQSLSDS IVSDSLSPAS
201: AQLPPHLSNF MSHMSLALNK LSSLEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCILAVAE YFHRLQALSS LWLARPRQDG

Best Arabidopsis Sequence Match ( AT5G06839.2 )
(BLAST)

001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNKEGN
101: RKGLASSDHD IPKSSDPKTL RRLAQNREAA RKSRLRKKAY VQQLESCRIK LTQLEQEIQR ARSQGVFFGG SLIGGDQQQG GLPIGPGNIS SAEAAVFDME
201: YARWLEEQQR LLNELRVATQ EHLSENELRM FVDTCLAHYD HLINLKAMVA KTDVFHLISG AWKTPAERCF LWMGGFRPSE IIKVIVNQIE PLTEQQIVGI
301: CGLQQSTQEA EEALSQGLEA LNQSLSDSIV SDSLPPASAP LPPHLSNFMS HMSLALNKLS ALEGFVLQAD NLRHQTIHRL NQLLTTRQEA RCLLAVAEYF
401: HRLQALSSLW LARPRQDG

Arabidopsis Description

TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.