Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra009233.1-P | Field mustard | cytosol | 60.37 | 93.57 |
AT5G06839.3 | Thale cress | nucleus | 92.86 | 87.61 |
CDY70714 | Canola | nucleus | 67.74 | 83.52 |
CDY70396 | Canola | mitochondrion | 33.87 | 70.33 |
PGSC0003DMT400029743 | Potato | nucleus, plastid | 53.69 | 61.32 |
KRH67029 | Soybean | nucleus | 64.75 | 57.23 |
KRG95350 | Soybean | nucleus | 64.52 | 57.03 |
VIT_08s0007g06160.t01 | Wine grape | nucleus | 64.52 | 57.03 |
GSMUA_Achr9P27700_001 | Banana | nucleus | 48.16 | 55.73 |
KRH71904 | Soybean | nucleus | 60.83 | 54.55 |
GSMUA_Achr3P11150_001 | Banana | nucleus | 51.38 | 53.86 |
Solyc10g080410.1.1 | Tomato | nucleus | 56.68 | 53.59 |
PGSC0003DMT400060865 | Potato | nucleus | 56.45 | 53.15 |
Solyc10g078670.1.1 | Tomato | nucleus | 59.45 | 52.98 |
KRH32997 | Soybean | nucleus | 60.37 | 50.68 |
Bra009241.1-P | Field mustard | nucleus | 34.33 | 48.06 |
Bra028713.1-P | Field mustard | nucleus | 35.94 | 47.85 |
Bra034767.1-P | Field mustard | nucleus | 35.48 | 46.53 |
Zm00001d020938_P002 | Maize | nucleus | 51.15 | 45.68 |
Bra001443.1-P | Field mustard | nucleus | 34.56 | 45.32 |
Bra038705.1-P | Field mustard | nucleus | 34.79 | 45.21 |
KXG35912 | Sorghum | nucleus | 50.69 | 44.0 |
Bra015646.1-P | Field mustard | nucleus | 32.95 | 42.18 |
GSMUA_Achr9P20200_001 | Banana | plastid | 52.3 | 41.5 |
Os09t0489500-02 | Rice | nucleus | 49.54 | 41.11 |
Zm00001d006027_P002 | Maize | nucleus | 47.23 | 40.76 |
Bra031364.1-P | Field mustard | nucleus | 35.48 | 40.74 |
TraesCS5A01G265600.1 | Wheat | nucleus | 48.39 | 40.54 |
TraesCS5D01G273500.1 | Wheat | nucleus | 48.16 | 40.35 |
TraesCS5B01G265300.1 | Wheat | nucleus | 48.85 | 40.3 |
Bra031622.1-P | Field mustard | nucleus | 38.94 | 39.49 |
Bra016389.1-P | Field mustard | nucleus | 33.18 | 39.13 |
HORVU5Hr1G073410.1 | Barley | nucleus | 49.08 | 37.57 |
Bra018634.1-P | Field mustard | nucleus | 40.78 | 37.26 |
Bra024366.1-P | Field mustard | nucleus | 30.65 | 36.24 |
Bra028604.1-P | Field mustard | nucleus | 30.18 | 36.19 |
Bra031871.1-P | Field mustard | nucleus | 29.95 | 35.14 |
Bra009063.1-P | Field mustard | nucleus | 29.26 | 34.89 |
Bra004329.1-P | Field mustard | nucleus | 34.33 | 33.79 |
Bra037809.1-P | Field mustard | nucleus | 29.26 | 32.4 |
Bra037374.1-P | Field mustard | nucleus | 19.59 | 27.07 |
Protein Annotations
MapMan:15.5.4.7.1 | EnsemblPlantsGene:Bra005914 | EnsemblPlants:Bra005914.1 | EnsemblPlants:Bra005914.1-P | ncoils:Coil | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | UniProt:M4CNX6 |
PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF241 | InterPro:TGA_domain | UniParc:UPI000253F656 |
SEG:seg | : | : | : | : | : |
Description
AT5G06839 (E=6e-134) | bZIP family transcription factor
Coordinates
chrA03:+:1199577..1204747
Molecular Weight (calculated)
48147.7 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.541
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGHHQNHHQ QLSSASATSS NGNFMNKDGY DLGEIDPSLF LYLDGQGHHD PPSTAPLPHH HTNQNLAMRP PTSTLNIFPS QPMHIEPPPS STPNTDNTRL
101: AAPSSSTRPS SEPSMDLANH SQFQLPQPSK SIKKEGNRKG PASSDYDIPK SSDPKAYVQQ LESCRIKLSQ LEQEIQRARS QGVFFGGSLI GGDQQQGGLP
201: TGPGNTSSEA AVFDMEYTRW LEEQQRLLTE LRMATQEHLA ENELRMFVDN CLAHHDHLIN LKAMVAKTDV FHLISGAWKT PAERCFLWMG GFRPSEIIKV
301: IVNQIEQLTE QQIVGICGLQ QSTHEAEEAL SQGLEALNQS LSDSIVSDSL SPASAQFPPH LSNFMSHMSL ALNKLSALEG FVLQADNLRH QTIHRLNQLL
401: TTRQEARCIL AVAEYFHRLQ ALSSLWLARP RQDG
101: AAPSSSTRPS SEPSMDLANH SQFQLPQPSK SIKKEGNRKG PASSDYDIPK SSDPKAYVQQ LESCRIKLSQ LEQEIQRARS QGVFFGGSLI GGDQQQGGLP
201: TGPGNTSSEA AVFDMEYTRW LEEQQRLLTE LRMATQEHLA ENELRMFVDN CLAHHDHLIN LKAMVAKTDV FHLISGAWKT PAERCFLWMG GFRPSEIIKV
301: IVNQIEQLTE QQIVGICGLQ QSTHEAEEAL SQGLEALNQS LSDSIVSDSL SPASAQFPPH LSNFMSHMSL ALNKLSALEG FVLQADNLRH QTIHRLNQLL
401: TTRQEARCIL AVAEYFHRLQ ALSSLWLARP RQDG
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.