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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009233.1-P Field mustard cytosol 60.37 93.57
AT5G06839.3 Thale cress nucleus 92.86 87.61
CDY70714 Canola nucleus 67.74 83.52
CDY70396 Canola mitochondrion 33.87 70.33
PGSC0003DMT400029743 Potato nucleus, plastid 53.69 61.32
KRH67029 Soybean nucleus 64.75 57.23
KRG95350 Soybean nucleus 64.52 57.03
VIT_08s0007g06160.t01 Wine grape nucleus 64.52 57.03
GSMUA_Achr9P27700_001 Banana nucleus 48.16 55.73
KRH71904 Soybean nucleus 60.83 54.55
GSMUA_Achr3P11150_001 Banana nucleus 51.38 53.86
Solyc10g080410.1.1 Tomato nucleus 56.68 53.59
PGSC0003DMT400060865 Potato nucleus 56.45 53.15
Solyc10g078670.1.1 Tomato nucleus 59.45 52.98
KRH32997 Soybean nucleus 60.37 50.68
Bra009241.1-P Field mustard nucleus 34.33 48.06
Bra028713.1-P Field mustard nucleus 35.94 47.85
Bra034767.1-P Field mustard nucleus 35.48 46.53
Zm00001d020938_P002 Maize nucleus 51.15 45.68
Bra001443.1-P Field mustard nucleus 34.56 45.32
Bra038705.1-P Field mustard nucleus 34.79 45.21
KXG35912 Sorghum nucleus 50.69 44.0
Bra015646.1-P Field mustard nucleus 32.95 42.18
GSMUA_Achr9P20200_001 Banana plastid 52.3 41.5
Os09t0489500-02 Rice nucleus 49.54 41.11
Zm00001d006027_P002 Maize nucleus 47.23 40.76
Bra031364.1-P Field mustard nucleus 35.48 40.74
TraesCS5A01G265600.1 Wheat nucleus 48.39 40.54
TraesCS5D01G273500.1 Wheat nucleus 48.16 40.35
TraesCS5B01G265300.1 Wheat nucleus 48.85 40.3
Bra031622.1-P Field mustard nucleus 38.94 39.49
Bra016389.1-P Field mustard nucleus 33.18 39.13
HORVU5Hr1G073410.1 Barley nucleus 49.08 37.57
Bra018634.1-P Field mustard nucleus 40.78 37.26
Bra024366.1-P Field mustard nucleus 30.65 36.24
Bra028604.1-P Field mustard nucleus 30.18 36.19
Bra031871.1-P Field mustard nucleus 29.95 35.14
Bra009063.1-P Field mustard nucleus 29.26 34.89
Bra004329.1-P Field mustard nucleus 34.33 33.79
Bra037809.1-P Field mustard nucleus 29.26 32.4
Bra037374.1-P Field mustard nucleus 19.59 27.07
Protein Annotations
MapMan:15.5.4.7.1EnsemblPlantsGene:Bra005914EnsemblPlants:Bra005914.1EnsemblPlants:Bra005914.1-Pncoils:CoilGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0006139GO:GO:0006351GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565InterPro:IPR025422UniProt:M4CNX6
PFAM:PF14144PFscan:PS51806PANTHER:PTHR22952PANTHER:PTHR22952:SF241InterPro:TGA_domainUniParc:UPI000253F656
SEG:seg:::::
Description
AT5G06839 (E=6e-134) | bZIP family transcription factor
Coordinates
chrA03:+:1199577..1204747
Molecular Weight (calculated)
48147.7 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.541
Length
434 amino acids
Sequence
(BLAST)
001: MQGHHQNHHQ QLSSASATSS NGNFMNKDGY DLGEIDPSLF LYLDGQGHHD PPSTAPLPHH HTNQNLAMRP PTSTLNIFPS QPMHIEPPPS STPNTDNTRL
101: AAPSSSTRPS SEPSMDLANH SQFQLPQPSK SIKKEGNRKG PASSDYDIPK SSDPKAYVQQ LESCRIKLSQ LEQEIQRARS QGVFFGGSLI GGDQQQGGLP
201: TGPGNTSSEA AVFDMEYTRW LEEQQRLLTE LRMATQEHLA ENELRMFVDN CLAHHDHLIN LKAMVAKTDV FHLISGAWKT PAERCFLWMG GFRPSEIIKV
301: IVNQIEQLTE QQIVGICGLQ QSTHEAEEAL SQGLEALNQS LSDSIVSDSL SPASAQFPPH LSNFMSHMSL ALNKLSALEG FVLQADNLRH QTIHRLNQLL
401: TTRQEARCIL AVAEYFHRLQ ALSSLWLARP RQDG
Best Arabidopsis Sequence Match ( AT5G06839.3 )
(BLAST)
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.