Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70235 | Canola | nucleus | 84.66 | 81.87 |
| CDY70396 | Canola | mitochondrion | 46.31 | 77.99 |
| CDY71150 | Canola | nucleus, plastid | 42.61 | 75.76 |
| Bra005914.1-P | Field mustard | nucleus | 83.52 | 67.74 |
| CDX70061 | Canola | nucleus | 85.51 | 66.74 |
| CDX98963 | Canola | nucleus | 85.23 | 66.52 |
| AT5G06839.3 | Thale cress | nucleus | 84.38 | 64.57 |
| PGSC0003DMT400029743 | Potato | nucleus, plastid | 56.82 | 52.63 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 52.84 | 49.6 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 53.69 | 45.65 |
| VIT_08s0007g06160.t01 | Wine grape | nucleus | 63.35 | 45.42 |
| KRH67029 | Soybean | nucleus | 63.35 | 45.42 |
| CDY14061 | Canola | nucleus | 42.05 | 45.4 |
| CDY05010 | Canola | nucleus | 42.05 | 45.4 |
| KRG95350 | Soybean | nucleus | 63.07 | 45.21 |
| CDY08443 | Canola | nucleus | 41.48 | 44.11 |
| CDY42138 | Canola | nucleus | 40.34 | 43.83 |
| CDX98971 | Canola | nucleus | 40.62 | 43.6 |
| CDX70053 | Canola | nucleus | 40.34 | 43.43 |
| CDY00762 | Canola | nucleus | 40.06 | 42.6 |
| CDX73830 | Canola | nucleus | 40.06 | 42.6 |
| CDY50562 | Canola | nucleus | 40.34 | 42.52 |
| KRH71904 | Soybean | nucleus | 58.24 | 42.36 |
| CDY52616 | Canola | nucleus | 40.06 | 42.34 |
| PGSC0003DMT400060865 | Potato | nucleus | 54.55 | 41.65 |
| Solyc10g080410.1.1 | Tomato | nucleus | 53.98 | 41.39 |
| Solyc10g078670.1.1 | Tomato | nucleus | 57.1 | 41.27 |
| KRH32997 | Soybean | nucleus | 58.52 | 39.85 |
| Zm00001d020938_P002 | Maize | nucleus | 52.56 | 38.07 |
| CDX68037 | Canola | nucleus | 39.49 | 37.47 |
| KXG35912 | Sorghum | nucleus | 52.27 | 36.8 |
| CDY22689 | Canola | nucleus | 44.32 | 36.45 |
| CDY41495 | Canola | nucleus | 37.5 | 35.77 |
| CDY38253 | Canola | nucleus | 38.92 | 35.58 |
| CDY38843 | Canola | nucleus | 37.22 | 35.41 |
| Zm00001d006027_P002 | Maize | nucleus | 49.72 | 34.79 |
| TraesCS5D01G273500.1 | Wheat | nucleus | 50.85 | 34.56 |
| TraesCS5A01G265600.1 | Wheat | nucleus | 50.57 | 34.36 |
| Os09t0489500-02 | Rice | nucleus | 50.85 | 34.23 |
| TraesCS5B01G265300.1 | Wheat | nucleus | 51.14 | 34.22 |
| CDX85782 | Canola | nucleus | 34.94 | 33.98 |
| CDY40074 | Canola | nucleus | 34.94 | 33.98 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 51.99 | 33.46 |
| CDX95068 | Canola | nucleus | 44.89 | 33.05 |
| CDY08810 | Canola | nucleus | 34.38 | 32.97 |
| CDX93571 | Canola | nucleus | 44.6 | 32.85 |
| CDY21336 | Canola | nucleus | 38.92 | 32.78 |
| CDY06309 | Canola | nucleus | 44.89 | 32.64 |
| CDX69866 | Canola | nucleus | 33.52 | 32.42 |
| CDY37811 | Canola | nucleus | 33.81 | 32.16 |
| CDY33975 | Canola | nucleus | 33.81 | 32.16 |
| CDY21625 | Canola | nucleus | 33.24 | 32.14 |
| CDY14552 | Canola | nucleus | 33.24 | 31.88 |
| HORVU5Hr1G073410.1 | Barley | nucleus | 51.14 | 31.75 |
| CDX88399 | Canola | nucleus | 38.64 | 31.63 |
| CDX95999 | Canola | nucleus | 38.92 | 31.0 |
| CDY38608 | Canola | nucleus | 38.92 | 31.0 |
| CDX87494 | Canola | nucleus | 38.92 | 30.86 |
| CDX81273 | Canola | nucleus | 34.09 | 30.85 |
| CDY18683 | Canola | cytosol | 32.39 | 30.65 |
| CDY00417 | Canola | mitochondrion | 16.76 | 25.43 |
| CDX79240 | Canola | nucleus | 37.5 | 23.16 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078JV84 | UniProt:A0A078JV84 | EnsemblPlants:CDY70714 |
| ProteinID:CDY70714 | ProteinID:CDY70714.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00006917001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF07716 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF241 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EEEA60 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaUnng03970DBnaUnng03970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV84]
Coordinates
chrLK043037:+:145..3037
Molecular Weight (calculated)
39463.9 Da
IEP (calculated)
7.577
GRAVY (calculated)
-0.441
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTDFDSFVY NVFGKTDNTR LVAPSSSTRP SSEPSMDLTN HSQFQLPQPS KSIKKEGNRK GPASSDYDIP KSSDPKTLRR LAQNREAARK SRLRKKAYVQ
101: QLESCRIKLS QLEKEIQRAR SQGVFFGGSL IGGDQQQGGL PTGPGNTSSA EAAVFDMEYT RWQEEQQRLL TELRMATQEH LAENELRMFV DNCLAHYDHL
201: INLKAMVAKT DVFHLISGAW KSPAERCFLW MGGFRPSEII KVIVNQIEQL TEQQIVGICG LQQSTQEAEE ALSQGLEALN QSLSDSIVSD SLSPASAQFP
301: PHLSNFMSHM SLALNKLSAL EGFVLQVPSN PFLLFKTEVY TKLYQSLYIK YI
101: QLESCRIKLS QLEKEIQRAR SQGVFFGGSL IGGDQQQGGL PTGPGNTSSA EAAVFDMEYT RWQEEQQRLL TELRMATQEH LAENELRMFV DNCLAHYDHL
201: INLKAMVAKT DVFHLISGAW KSPAERCFLW MGGFRPSEII KVIVNQIEQL TEQQIVGICG LQQSTQEAEE ALSQGLEALN QSLSDSIVSD SLSPASAQFP
301: PHLSNFMSHM SLALNKLSAL EGFVLQVPSN PFLLFKTEVY TKLYQSLYIK YI
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.