Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81273 | Canola | nucleus | 97.04 | 92.8 |
| CDY33975 | Canola | nucleus | 89.52 | 90.0 |
| CDY08810 | Canola | nucleus | 88.71 | 89.92 |
| CDY37811 | Canola | nucleus | 88.98 | 89.46 |
| CDY14552 | Canola | nucleus | 87.37 | 88.56 |
| Bra037809.1-P | Field mustard | nucleus | 93.28 | 88.52 |
| AT5G65210.2 | Thale cress | nucleus | 86.29 | 87.23 |
| CDX85782 | Canola | nucleus | 77.42 | 79.56 |
| CDY40074 | Canola | nucleus | 76.61 | 78.73 |
| CDX69866 | Canola | nucleus | 75.81 | 77.47 |
| CDY21625 | Canola | nucleus | 73.92 | 75.55 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 66.13 | 70.49 |
| KRG97639 | Soybean | nucleus | 63.71 | 65.47 |
| KRH31239 | Soybean | nucleus | 63.17 | 64.56 |
| KRH59415 | Soybean | nucleus | 59.41 | 59.73 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 58.33 | 59.45 |
| KRH43266 | Soybean | nucleus | 60.48 | 59.37 |
| Solyc04g011670.2.1 | Tomato | nucleus | 58.6 | 58.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.11 | 57.91 |
| Solyc04g054320.2.1 | Tomato | nucleus | 56.72 | 57.03 |
| PGSC0003DMT400033308 | Potato | nucleus | 54.57 | 57.02 |
| GSMUA_Achr10P... | Banana | nucleus | 51.88 | 54.99 |
| CDY41495 | Canola | nucleus | 54.3 | 54.74 |
| CDY38843 | Canola | nucleus | 54.3 | 54.59 |
| CDY38253 | Canola | nucleus | 55.65 | 53.77 |
| Zm00001d016312_P001 | Maize | cytosol | 13.44 | 53.76 |
| CDX68037 | Canola | nucleus | 53.23 | 53.37 |
| PGSC0003DMT400016235 | Potato | nucleus | 54.57 | 51.79 |
| CDY21336 | Canola | nucleus | 55.91 | 49.76 |
| CDY14061 | Canola | nucleus | 42.47 | 48.47 |
| CDY05010 | Canola | nucleus | 42.47 | 48.47 |
| CDY08443 | Canola | nucleus | 43.01 | 48.34 |
| CDX98971 | Canola | nucleus | 42.2 | 47.87 |
| CDX73830 | Canola | nucleus | 42.47 | 47.73 |
| CDX70053 | Canola | nucleus | 41.94 | 47.71 |
| CDY50562 | Canola | nucleus | 42.74 | 47.6 |
| CDY00762 | Canola | nucleus | 42.2 | 47.43 |
| CDY52616 | Canola | nucleus | 42.2 | 47.15 |
| CDX88399 | Canola | nucleus | 54.03 | 46.74 |
| Os04t0637000-01 | Rice | nucleus | 48.92 | 45.84 |
| CDX87494 | Canola | nucleus | 54.57 | 45.72 |
| KXG27222 | Sorghum | nucleus | 48.39 | 44.12 |
| KXG38496 | Sorghum | nucleus | 36.29 | 43.41 |
| Zm00001d026398_P006 | Maize | nucleus | 47.31 | 42.72 |
| KRG92164 | Soybean | nucleus | 26.88 | 42.55 |
| KRH34622 | Soybean | cytosol | 25.81 | 41.56 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 47.31 | 41.41 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 48.39 | 41.38 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 46.51 | 41.29 |
| CDY42138 | Canola | nucleus | 35.75 | 41.05 |
| Zm00001d024160_P003 | Maize | nucleus | 46.51 | 40.8 |
| CDY70396 | Canola | mitochondrion | 22.31 | 39.71 |
| CDY71150 | Canola | nucleus, plastid | 20.7 | 38.89 |
| Zm00001d002143_P002 | Maize | cytosol | 45.43 | 38.5 |
| Os08t0176900-01 | Rice | nucleus | 40.05 | 38.3 |
| Zm00001d041428_P001 | Maize | cytosol | 15.59 | 37.18 |
| CDX95999 | Canola | nucleus | 40.86 | 34.39 |
| OQU79985 | Sorghum | golgi, vacuole | 47.58 | 34.3 |
| CDY38608 | Canola | nucleus | 40.59 | 34.16 |
| CDY22689 | Canola | nucleus | 39.25 | 34.11 |
| CDY70714 | Canola | nucleus | 30.65 | 32.39 |
| CDX70061 | Canola | nucleus | 38.17 | 31.49 |
| CDX98963 | Canola | nucleus | 37.9 | 31.26 |
| CDX95068 | Canola | nucleus | 40.05 | 31.17 |
| CDX93571 | Canola | nucleus | 39.78 | 30.96 |
| CDY06309 | Canola | nucleus | 40.05 | 30.79 |
| CDY70235 | Canola | nucleus | 30.11 | 30.77 |
| CDX79240 | Canola | nucleus | 46.77 | 30.53 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 32.53 | 28.61 |
| CDY00417 | Canola | mitochondrion | 17.47 | 28.02 |
Protein Annotations
| MapMan:15.5.4.7.1 | GO:A0A078G214 | UniProt:A0A078G214 | EnsemblPlants:CDY18683 | ProteinID:CDY18683 | ProteinID:CDY18683.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00005760001 | InterPro:IPR025422 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF266 |
| InterPro:TGA_domain | UniParc:UPI0004EE4DD2 | : | : | : | : |
Description
BnaA09g07120DBnaA09g07120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G214]
Coordinates
chrLK032087:-:504425..507911
Molecular Weight (calculated)
42488.6 Da
IEP (calculated)
7.189
GRAVY (calculated)
-0.472
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTSTHFVP PRRVNIYEPL HQFGMWGETF KSNIGNGNIN TPSHIIIPNN QKLDNNLSED TSHGTPLIFD QETSTSRHPD KIKRRLAQNR EAAKKKNNVL
101: ISFQFAYVQQ LETSRLKLIQ LEQELDRARQ QGFYVGNGID TSTTTSLGFS ENMNPGIAAF EMEYGQWIEE QNKQICELRT VLQGHIGDVE LRLLVEIAMK
201: HYFDLFRMKS AAAKEDVFFV MSGMWRTSAE RFFLWIGGFR PSDLIKVLLP HFDVMTDQQI LDVCNLRQSC QQAEDALSQG MEKLQHTLAD CVAGGRLGEG
301: NYIPQVNSAM ERAEASVSFV NQADHLRHET LQQMHRILTT RQAARGLLAL GEYFQRLRAL SSSWATRHRE PT
101: ISFQFAYVQQ LETSRLKLIQ LEQELDRARQ QGFYVGNGID TSTTTSLGFS ENMNPGIAAF EMEYGQWIEE QNKQICELRT VLQGHIGDVE LRLLVEIAMK
201: HYFDLFRMKS AAAKEDVFFV MSGMWRTSAE RFFLWIGGFR PSDLIKVLLP HFDVMTDQQI LDVCNLRQSC QQAEDALSQG MEKLQHTLAD CVAGGRLGEG
301: NYIPQVNSAM ERAEASVSFV NQADHLRHET LQQMHRILTT RQAARGLLAL GEYFQRLRAL SSSWATRHRE PT
001: MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
101: LRKKAYVQQL ETSRLKLIQL EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG HINDIELRSL VENAMKHYFE
201: LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP
301: QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW ATRHREPT
Arabidopsis Description
TGA1Transcription factor TGA1 [Source:UniProtKB/Swiss-Prot;Acc:Q39237]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.