Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009241.1-P | Field mustard | nucleus | 93.88 | 99.03 |
| CDX98971 | Canola | nucleus | 99.08 | 98.78 |
| AT5G06950.5 | Thale cress | nucleus | 93.27 | 92.42 |
| CDX73830 | Canola | nucleus | 90.52 | 89.43 |
| CDY08443 | Canola | nucleus | 90.21 | 89.12 |
| CDY00762 | Canola | nucleus | 90.21 | 89.12 |
| CDY50562 | Canola | nucleus | 90.83 | 88.92 |
| CDY52616 | Canola | nucleus | 89.91 | 88.29 |
| CDY14061 | Canola | nucleus | 80.12 | 80.37 |
| CDY05010 | Canola | nucleus | 79.82 | 80.06 |
| CDY42138 | Canola | nucleus | 77.68 | 78.4 |
| Solyc11g064950.1.1 | Tomato | nucleus | 76.45 | 77.16 |
| PGSC0003DMT400024428 | Potato | nucleus | 76.45 | 77.16 |
| Os01t0279900-01 | Rice | nucleus | 77.37 | 76.9 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 77.98 | 76.81 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 77.68 | 76.51 |
| KRH36324 | Soybean | nucleus | 77.37 | 76.2 |
| EES02530 | Sorghum | nucleus | 74.92 | 74.24 |
| Solyc01g008730.2.1 | Tomato | nucleus | 74.01 | 74.01 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 74.62 | 73.49 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 74.62 | 73.49 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 74.31 | 73.41 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 74.01 | 72.89 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 33.03 | 72.48 |
| Os07t0687700-01 | Rice | nucleus | 74.01 | 72.46 |
| KXG39494 | Sorghum | nucleus | 74.01 | 72.24 |
| Os03t0318600-01 | Rice | nucleus | 72.78 | 71.47 |
| KXG36997 | Sorghum | nucleus | 72.78 | 71.47 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 72.78 | 71.26 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 72.78 | 71.26 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 72.78 | 71.04 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 72.78 | 71.04 |
| Zm00001d022542_P002 | Maize | nucleus | 72.17 | 70.87 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 72.48 | 70.54 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 72.48 | 70.54 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 37.92 | 70.45 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 72.17 | 70.24 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 70.03 | 67.95 |
| KXG22247 | Sorghum | nucleus | 63.91 | 62.95 |
| Os05t0492000-00 | Rice | nucleus | 61.77 | 61.21 |
| Zm00001d010658_P001 | Maize | nucleus | 61.77 | 58.55 |
| Zm00001d008225_P001 | Maize | nucleus | 74.92 | 58.33 |
| KRG93068 | Soybean | nucleus | 77.37 | 56.98 |
| Zm00001d028936_P001 | Maize | nucleus | 66.97 | 56.01 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 79.51 | 55.44 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 56.57 | 55.22 |
| KRH20680 | Soybean | nucleus | 78.29 | 54.58 |
| GSMUA_Achr10P... | Banana | nucleus | 75.84 | 54.27 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 56.27 | 54.12 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 55.66 | 53.69 |
| GSMUA_Achr11P... | Banana | nucleus | 77.98 | 53.35 |
| EES03778 | Sorghum | nucleus | 75.84 | 52.99 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 76.45 | 52.63 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 76.76 | 52.62 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 75.84 | 51.99 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 75.54 | 51.78 |
| KRH13334 | Soybean | nucleus | 77.37 | 50.91 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 51.68 | 49.27 |
| CDY71150 | Canola | nucleus, plastid | 28.75 | 47.47 |
| Zm00001d043153_P001 | Maize | nucleus | 61.16 | 47.39 |
| CDY70396 | Canola | mitochondrion | 29.97 | 46.89 |
| CDX69866 | Canola | nucleus | 50.76 | 45.6 |
| CDX85782 | Canola | nucleus | 50.46 | 45.58 |
| CDX68037 | Canola | nucleus | 51.68 | 45.55 |
| CDY21625 | Canola | nucleus | 50.46 | 45.33 |
| Zm00001d012553_P003 | Maize | nucleus | 65.14 | 45.32 |
| CDY40074 | Canola | nucleus | 50.15 | 45.3 |
| CDY38608 | Canola | nucleus | 61.16 | 45.25 |
| CDX95999 | Canola | nucleus | 61.16 | 45.25 |
| CDY08810 | Canola | nucleus | 50.76 | 45.23 |
| CDY41495 | Canola | nucleus | 50.76 | 44.99 |
| CDY14552 | Canola | nucleus | 49.85 | 44.41 |
| CDY38843 | Canola | nucleus | 49.85 | 44.05 |
| CDY37811 | Canola | nucleus | 49.85 | 44.05 |
| CDY33975 | Canola | nucleus | 49.85 | 44.05 |
| CDY38253 | Canola | nucleus | 51.38 | 43.64 |
| CDY22689 | Canola | nucleus | 56.57 | 43.22 |
| CDY18683 | Canola | cytosol | 47.71 | 41.94 |
| CDX81273 | Canola | nucleus | 49.54 | 41.65 |
| CDY70714 | Canola | nucleus | 43.43 | 40.34 |
| CDY21336 | Canola | nucleus | 51.38 | 40.19 |
| Os01t0808100-01 | Rice | nucleus | 44.65 | 40.11 |
| CDX88399 | Canola | nucleus | 52.29 | 39.77 |
| CDY70235 | Canola | nucleus | 44.04 | 39.56 |
| CDX87494 | Canola | nucleus | 53.21 | 39.19 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 41.9 | 39.03 |
| CDX95068 | Canola | nucleus | 56.88 | 38.91 |
| CDX93571 | Canola | nucleus | 56.57 | 38.7 |
| CDX70061 | Canola | nucleus | 53.21 | 38.58 |
| CDY06309 | Canola | nucleus | 56.88 | 38.43 |
| CDX98963 | Canola | nucleus | 52.91 | 38.36 |
| CDY00417 | Canola | mitochondrion | 19.57 | 27.59 |
| CDX79240 | Canola | nucleus | 44.95 | 25.79 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | GO:A0A078C511 | EnsemblPlants:CDX70053 |
| ProteinID:CDX70053 | ProteinID:CDX70053.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00136153001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE297C |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA10g24020D
Coordinates
chrLK031790:-:2895792..2898262
Molecular Weight (calculated)
36379.3 Da
IEP (calculated)
9.314
GRAVY (calculated)
-0.498
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MADMSPLTDV STDGDRDLGS EGALVNTAAS DSSERSKNKL DQKTVRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE QELQRARQQG VFISSSGDQA
101: HSTGGNGALA FDAEYSRWLE EKNKRMNEMR SALNAHAGDG ELLIIVDGVM AHYEELFRIK SNAAKNDVFH LLYGMWKTPA ERCFLWLGGF RSSEILKLLV
201: NQLEPMTERQ VMGINSLQET SQQAEDALSQ GMESLQQSLA DTLSSGTLGS SSSGNVASYM GQMAMAMGKL GTLEGFIRQA DNLRLQTLQQ MIRVLTTRQS
301: ARALLAIHDY SSRLRALSSL WLARPRE
101: HSTGGNGALA FDAEYSRWLE EKNKRMNEMR SALNAHAGDG ELLIIVDGVM AHYEELFRIK SNAAKNDVFH LLYGMWKTPA ERCFLWLGGF RSSEILKLLV
201: NQLEPMTERQ VMGINSLQET SQQAEDALSQ GMESLQQSLA DTLSSGTLGS SSSGNVASYM GQMAMAMGKL GTLEGFIRQA DNLRLQTLQQ MIRVLTTRQS
301: ARALLAIHDY SSRLRALSSL WLARPRE
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Arabidopsis Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.