Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009063.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY21625 | Canola | nucleus | 96.7 | 96.7 |
| CDX85782 | Canola | nucleus | 90.93 | 91.44 |
| CDY40074 | Canola | nucleus | 90.38 | 90.88 |
| AT5G10030.3 | Thale cress | nucleus | 90.11 | 90.11 |
| CDY08810 | Canola | nucleus | 81.59 | 80.93 |
| CDY33975 | Canola | nucleus | 82.14 | 80.81 |
| CDY37811 | Canola | nucleus | 81.59 | 80.27 |
| CDY14552 | Canola | nucleus | 80.22 | 79.56 |
| CDY18683 | Canola | cytosol | 77.47 | 75.81 |
| CDX81273 | Canola | nucleus | 79.4 | 74.29 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 67.31 | 70.2 |
| KRG97639 | Soybean | nucleus | 66.76 | 67.13 |
| KRH31239 | Soybean | nucleus | 65.93 | 65.93 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 61.54 | 61.37 |
| KRH59415 | Soybean | nucleus | 62.09 | 61.08 |
| KRH43266 | Soybean | nucleus | 62.36 | 59.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.69 | 59.32 |
| Zm00001d016312_P001 | Maize | cytosol | 15.11 | 59.14 |
| Solyc04g011670.2.1 | Tomato | nucleus | 60.44 | 58.82 |
| PGSC0003DMT400033308 | Potato | nucleus | 56.87 | 58.15 |
| Solyc04g054320.2.1 | Tomato | nucleus | 59.07 | 58.11 |
| GSMUA_Achr10P... | Banana | nucleus | 53.85 | 55.84 |
| PGSC0003DMT400016235 | Potato | nucleus | 56.87 | 52.81 |
| CDY08443 | Canola | nucleus | 47.8 | 52.57 |
| CDY38843 | Canola | nucleus | 53.02 | 52.16 |
| CDY41495 | Canola | nucleus | 52.75 | 52.03 |
| CDX68037 | Canola | nucleus | 53.02 | 52.02 |
| CDY38253 | Canola | nucleus | 54.67 | 51.69 |
| CDY50562 | Canola | nucleus | 46.98 | 51.2 |
| CDX98971 | Canola | nucleus | 45.88 | 50.91 |
| CDX70053 | Canola | nucleus | 45.6 | 50.76 |
| CDY52616 | Canola | nucleus | 46.43 | 50.75 |
| CDY05010 | Canola | nucleus | 45.33 | 50.61 |
| CDY14061 | Canola | nucleus | 45.33 | 50.61 |
| CDX73830 | Canola | nucleus | 45.6 | 50.15 |
| Os04t0637000-01 | Rice | nucleus | 54.4 | 49.87 |
| CDY00762 | Canola | nucleus | 45.33 | 49.85 |
| CDY21336 | Canola | nucleus | 54.95 | 47.85 |
| KXG27222 | Sorghum | nucleus | 52.75 | 47.06 |
| Zm00001d026398_P006 | Maize | nucleus | 52.2 | 46.12 |
| CDY42138 | Canola | nucleus | 40.66 | 45.68 |
| CDX88399 | Canola | nucleus | 53.85 | 45.58 |
| KRG92164 | Soybean | nucleus | 29.4 | 45.53 |
| CDX87494 | Canola | nucleus | 54.67 | 44.82 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 50.27 | 43.68 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 50.55 | 43.29 |
| KRH34622 | Soybean | cytosol | 27.47 | 43.29 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 51.65 | 43.22 |
| KXG38496 | Sorghum | nucleus | 36.81 | 43.09 |
| CDY71150 | Canola | nucleus, plastid | 22.8 | 41.92 |
| CDY70396 | Canola | mitochondrion | 23.35 | 40.67 |
| Os08t0176900-01 | Rice | nucleus | 43.13 | 40.36 |
| Zm00001d024160_P003 | Maize | nucleus | 46.98 | 40.33 |
| Zm00001d002143_P002 | Maize | cytosol | 48.63 | 40.32 |
| Zm00001d041428_P001 | Maize | cytosol | 17.03 | 39.74 |
| CDX95999 | Canola | nucleus | 44.78 | 36.88 |
| CDY38608 | Canola | nucleus | 44.78 | 36.88 |
| OQU79985 | Sorghum | golgi, vacuole | 48.63 | 34.3 |
| CDY22689 | Canola | nucleus | 39.84 | 33.88 |
| CDY70714 | Canola | nucleus | 32.42 | 33.52 |
| CDX70061 | Canola | nucleus | 40.11 | 32.37 |
| CDX98963 | Canola | nucleus | 39.84 | 32.15 |
| CDY70235 | Canola | nucleus | 32.14 | 32.14 |
| CDX95068 | Canola | nucleus | 40.93 | 31.17 |
| CDX93571 | Canola | nucleus | 40.66 | 30.96 |
| CDY06309 | Canola | nucleus | 40.66 | 30.58 |
| CDY00417 | Canola | mitochondrion | 19.23 | 30.17 |
| CDX79240 | Canola | nucleus | 46.43 | 29.65 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 33.79 | 29.08 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078BYP2 | EnsemblPlants:CDX69866 | ProteinID:CDX69866 |
| ProteinID:CDX69866.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00135931001 | InterPro:IPR004827 | InterPro:IPR025422 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF180 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI000058C631 | InterPro:bZIP |
Description
BnaA10g22150D
Coordinates
chrLK031790:+:2167729..2170253
Molecular Weight (calculated)
41819.7 Da
IEP (calculated)
7.120
GRAVY (calculated)
-0.569
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTTTSTHFV PPTRFEIYDP LNQIGTMWEE SFKNNGGGFY TPNSIIIPTN QKPYSLSEDG TEGTPHKFDQ EASTSRHPDK TQRRLAQNRE AAKKSRLRKK
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYA SNRVDTNALS FSDNMCSGIV AFEMEYGHWV EEQNRQISEL RTVLNGQVSD IELRLLVDNA MKHYFQLFRM
201: KSAAAKLDVF YIMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPMMDQ QVLDVCNLRQ SCQQAEDAVS QGMEKLQHTL AESVAAGELG EGSYVPQITS
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWETRQ REPT
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYA SNRVDTNALS FSDNMCSGIV AFEMEYGHWV EEQNRQISEL RTVLNGQVSD IELRLLVDNA MKHYFQLFRM
201: KSAAAKLDVF YIMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPMMDQ QVLDVCNLRQ SCQQAEDAVS QGMEKLQHTL AESVAAGELG EGSYVPQITS
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWETRQ REPT
001: MNTTSTHFVP PRRFEVYEPL NQIGMWEESF KNNGDMYTPG SIIIPTNEKP DSLSEDTSHG TEGTPHKFDQ EASTSRHPDK IQRRLAQNRE AARKSRLRKK
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
Arabidopsis Description
TGA4At5g10030 [Source:UniProtKB/TrEMBL;Acc:Q24JJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.