Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68640.1 | CDX74327 | AT3G02000.1 | 19218396 |
| AT1G68640.1 | CDX91918 | AT3G02000.1 | 19218396 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004329.1-P | Field mustard | nucleus | 99.77 | 100.0 |
| CDY38608 | Canola | nucleus | 98.42 | 98.42 |
| AT1G68640.1 | Thale cress | nucleus | 90.72 | 88.72 |
| Os10t0566200-00 | Rice | extracellular | 16.97 | 63.56 |
| CDY08443 | Canola | nucleus | 47.51 | 63.44 |
| VIT_01s0011g03230.t01 | Wine grape | nucleus | 64.03 | 62.47 |
| CDX73830 | Canola | nucleus | 46.38 | 61.93 |
| CDY00762 | Canola | nucleus | 46.38 | 61.93 |
| CDY50562 | Canola | nucleus | 46.61 | 61.68 |
| CDY52616 | Canola | nucleus | 46.38 | 61.56 |
| CDY05010 | Canola | nucleus | 45.25 | 61.35 |
| CDX98971 | Canola | nucleus | 45.48 | 61.28 |
| CDX70053 | Canola | nucleus | 45.25 | 61.16 |
| CDY14061 | Canola | nucleus | 45.02 | 61.04 |
| Os06t0265400-01 | Rice | nucleus | 51.58 | 59.22 |
| KRH35977 | Soybean | nucleus | 59.05 | 57.24 |
| KRG90784 | Soybean | nucleus | 58.82 | 57.14 |
| GSMUA_Achr9P15550_001 | Banana | nucleus | 55.43 | 57.11 |
| Solyc05g009660.2.1 | Tomato | nucleus | 61.76 | 56.41 |
| PGSC0003DMT400033741 | Potato | nucleus | 61.31 | 56.11 |
| HORVU7Hr1G042180.5 | Barley | nucleus | 47.51 | 55.7 |
| CDY42138 | Canola | nucleus | 40.05 | 54.63 |
| KRH70569 | Soybean | nucleus | 57.69 | 54.6 |
| Os01t0882200-00 | Rice | cytosol, extracellular | 17.42 | 54.23 |
| KRH75411 | Soybean | nucleus | 58.14 | 52.88 |
| TraesCS7A01G207100.1 | Wheat | nucleus | 52.49 | 52.37 |
| TraesCS7D01G209800.1 | Wheat | nucleus | 52.49 | 51.79 |
| TraesCS7B01G114300.1 | Wheat | nucleus | 52.26 | 51.56 |
| Zm00001d037316_P008 | Maize | cytosol, nucleus, peroxisome, plastid | 37.56 | 48.97 |
| Zm00001d037317_P003 | Maize | nucleus | 47.74 | 48.84 |
| CDX85782 | Canola | nucleus | 37.78 | 46.13 |
| OQU76203 | Sorghum | nucleus | 48.19 | 46.1 |
| CDY40074 | Canola | nucleus | 37.56 | 45.86 |
| CDY08810 | Canola | nucleus | 37.33 | 44.96 |
| CDY71150 | Canola | nucleus, plastid | 20.14 | 44.95 |
| CDX69866 | Canola | nucleus | 36.88 | 44.78 |
| CDY14552 | Canola | nucleus | 37.1 | 44.69 |
| CDY70396 | Canola | mitochondrion | 21.04 | 44.5 |
| CDY21625 | Canola | nucleus | 36.2 | 43.96 |
| CDX68037 | Canola | nucleus | 36.65 | 43.67 |
| CDY33975 | Canola | nucleus | 36.43 | 43.51 |
| CDY37811 | Canola | nucleus | 36.43 | 43.51 |
| CDY41495 | Canola | nucleus | 36.2 | 43.36 |
| CDY38843 | Canola | nucleus | 35.97 | 42.97 |
| CDY38253 | Canola | nucleus | 36.88 | 42.34 |
| CDY18683 | Canola | cytosol | 34.39 | 40.86 |
| CDX81273 | Canola | nucleus | 35.75 | 40.62 |
| CDY22689 | Canola | nucleus | 38.69 | 39.95 |
| CDY21336 | Canola | nucleus | 37.1 | 39.23 |
| CDY70714 | Canola | nucleus | 31.0 | 38.92 |
| CDX88399 | Canola | nucleus | 37.33 | 38.37 |
| CDX87494 | Canola | nucleus | 38.24 | 38.06 |
| CDX70061 | Canola | nucleus | 38.46 | 37.69 |
| CDX98963 | Canola | nucleus | 38.24 | 37.47 |
| CDY70235 | Canola | nucleus | 30.77 | 37.36 |
| CDX93571 | Canola | nucleus | 40.27 | 37.24 |
| CDX95068 | Canola | nucleus | 40.27 | 37.24 |
| CDY06309 | Canola | nucleus | 40.27 | 36.78 |
| CDY00417 | Canola | mitochondrion | 14.03 | 26.72 |
| CDX79240 | Canola | nucleus | 32.13 | 24.91 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | GO:A0A078E5W9 | EnsemblPlants:CDX95999 |
| ProteinID:CDX95999 | ProteinID:CDX95999.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00102027001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF372 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EF4515 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA07g27320D
Coordinates
chrLK031892:+:537984..540688
Molecular Weight (calculated)
49780.8 Da
IEP (calculated)
6.025
GRAVY (calculated)
-0.484
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSSFKTVPF NPDFYSQASF FFRGDSCLDE FHQPINGFHH DEAVGLSPNV TVAASNNLHY TTFDTVMDYG LRERLEGEDE CLDTGELMYQ RGTRLVGGGG
101: EVNSSLDKWC DSVSAMADNS QHTDTSTDID TDDKSQLNGV NQGMLLATNC SDQSKTLRRL AQNREAARKS RLRKKAYVQQ LENSRIRLAQ LEEELKRARQ
201: QQGCSVERGA SRENTHAPAG NGVFSFELEY ARWMEEHQRL INDLRAGVHS QLGDNELRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM WQTPAERFFM
301: WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN FLRQADLLRQ
401: QTLQQLHRIL TTRQAARAFL VIHDYICRLR ALSSLWLARP RD
101: EVNSSLDKWC DSVSAMADNS QHTDTSTDID TDDKSQLNGV NQGMLLATNC SDQSKTLRRL AQNREAARKS RLRKKAYVQQ LENSRIRLAQ LEEELKRARQ
201: QQGCSVERGA SRENTHAPAG NGVFSFELEY ARWMEEHQRL INDLRAGVHS QLGDNELRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM WQTPAERFFM
301: WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN FLRQADLLRQ
401: QTLQQLHRIL TTRQAARAFL VIHDYICRLR ALSSLWLARP RD
001: MQSSFKTVPF TPDFYSQSSY FFRGDSCLEE FHQPVNGFHH EEAIDLSPNV TIASANLHYT TFDTVMDCGG GGGGGLRERL EGGEEECLDT GQLVYQKGTR
101: LVGGGVGEVN SSWCDSVSAM ADNSQHTDTS TDIDTDDKTQ LNGGHQGMLL ATNCSDQSNV KSSDQRTLRR LAQNREAARK SRLRKKAYVQ QLENSRIRLA
201: QLEEELKRAR QQGSLVERGV SADHTHLAAG NGVFSFELEY TRWKEEHQRM INDLRSGVNS QLGDNDLRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM
301: WKTPAERFFM WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN
401: FLRQADLLRQ QTLQQLHRIL TTRQAARAFL VIHDYISRLR ALSSLWLARP RD
101: LVGGGVGEVN SSWCDSVSAM ADNSQHTDTS TDIDTDDKTQ LNGGHQGMLL ATNCSDQSNV KSSDQRTLRR LAQNREAARK SRLRKKAYVQ QLENSRIRLA
201: QLEEELKRAR QQGSLVERGV SADHTHLAAG NGVFSFELEY TRWKEEHQRM INDLRSGVNS QLGDNDLRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM
301: WKTPAERFFM WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN
401: FLRQADLLRQ QTLQQLHRIL TTRQAARAFL VIHDYISRLR ALSSLWLARP RD
Arabidopsis Description
PANTranscription factor PERIANTHIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SX27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.