CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038296_P001	Maize	nucleus	93.87	94.41
Os05t0443900-01	Rice	nucleus	72.03	77.69
TraesCS1B01G285800.1	Wheat	nucleus	74.14	73.57
TraesCS1D01G276100.2	Wheat	nucleus	73.75	73.19
HORVU1Hr1G073870.2	Barley	nucleus	72.99	72.85
TraesCS1A01G276600.2	Wheat	nucleus	72.99	72.43
KXG33735	Sorghum	nucleus	65.71	64.35
GSMUA_Achr11P...	Banana	cytosol	26.25	56.61
EES02530	Sorghum	nucleus	33.14	52.42
Solyc11g068370.1.1	Tomato	nucleus	37.16	52.15
GSMUA_Achr11P...	Banana	nucleus	47.51	50.41
KXG39494	Sorghum	nucleus	31.99	49.85
KXG36997	Sorghum	nucleus	31.8	49.85
PGSC0003DMT400067782	Potato	nucleus	31.42	49.85
VIT_06s0080g00360.t01	Wine grape	nucleus	47.32	49.4
GSMUA_Achr10P...	Banana	nucleus	44.64	49.36
GSMUA_Achr5P26200_001	Banana	nucleus	38.31	49.26
CDY22689	Canola	nucleus	40.04	48.83
Bra031622.1-P	Field mustard	nucleus	39.85	48.6
KRH22685	Soybean	nucleus	45.59	48.57
KRH26635	Soybean	nucleus	45.4	48.57
Solyc06g074320.2.1	Tomato	nucleus	46.17	48.1
PGSC0003DMT400018306	Potato	nucleus	44.83	47.95
CDX95068	Canola	nucleus	43.87	47.91
Bra018634.1-P	Field mustard	nucleus	43.49	47.79
GSMUA_Achr3P22700_001	Banana	nucleus	46.17	47.63
CDX93571	Canola	nucleus	43.1	47.07
KXG22247	Sorghum	nucleus	29.89	46.99
AT1G08320.4	Thale cress	nucleus	43.1	46.78
KRH25227	Soybean	nucleus	44.83	46.71
KRH30432	Soybean	nucleus	44.06	46.65
OQU82891	Sorghum	nucleus	43.3	46.31
CDY06309	Canola	nucleus	42.91	46.28
KXG22976	Sorghum	nucleus	42.72	46.17
EES03778	Sorghum	nucleus	34.87	38.89
KXG27222	Sorghum	nucleus	29.31	37.5
KXG35912	Sorghum	nucleus	35.63	37.2
OQU89155	Sorghum	nucleus	30.27	37.18
OQU76203	Sorghum	nucleus	31.61	35.71
OQU76708	Sorghum	nucleus	20.88	35.05
KXG29702	Sorghum	nucleus	32.38	34.63
KXG38496	Sorghum	nucleus	20.5	34.41
GSMUA_Achr11P...	Banana	nucleus	20.31	34.3
KXG20382	Sorghum	cytosol	10.15	33.54
OQU79985	Sorghum	golgi, vacuole	28.16	28.49

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A1Z5R2W6	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR004827	InterPro:IPR025422	EnsemblPlants:OQU78097	ProteinID:OQU78097	ProteinID:OQU78097.1	ProteinID:OQU78099.1
PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952
PANTHER:PTHR22952:SF346	SMART:SM00338	EnsemblPlantsGene:SORBI_3009G155050	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000B4245B5
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:51158262..51167206

Molecular Weight (calculated)

57226.3 Da

IEP (calculated)

6.307

GRAVY (calculated)

-0.457

Length

522 amino acids

Sequence
(BLAST)

001: MAQGEESSWC MTSSDHGRAA SFSQAIACGS QRRASAAQPA NFLELQPAAA PYYFGELEEA LIHGTRTSVD HGMIGSDVDT ECKTAGYLAA RPPTLEIFPS
101: WPMSHLQQPY SGNSHSVGST TDSSSGQNSM PQTELVSPGS MRADSGQRQE VLMVTVDDYN YEQGLGAAAT TAQIFQQHAA GQDKGKHGST RKDGKLLDAK
201: TERRLAQNRE AARKSRLRKK AYVQQLETSR IRLQQIEQEL HGARSQGLFP GGGGAPGDLS SGAVIFDMEY ARWLEDDTKH MTELQAVLQP QIIDANLGAI
301: VEECMRHYDE LFHLRAMLAR SDVFHLMTGL WATTAERCFL WMGGFRPSEI LKMLIPQLDP LTEPQLLGMY NLQRSSEQTE EALGQGLQQL HQSLADAVGA
401: SPLSDGANVA NYTALMALAL DRLDTLESFY RQADSLRQQT LHQMRRILTT RQTARCFLSI SEYHRRLRAL SSVWASRPPT ESSVAAAAAA AGAENVSPAT
501: GTTSEQAALR PYNHQSQQFP GF

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.