Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046751_P001 | Maize | nucleus | 93.04 | 32.1 |
| Os06t0614100-01 | Rice | nucleus | 55.06 | 19.29 |
| KXG39494 | Sorghum | nucleus | 39.87 | 18.81 |
| KXG36997 | Sorghum | nucleus | 39.24 | 18.62 |
| EES02530 | Sorghum | nucleus | 35.44 | 16.97 |
| KXG22247 | Sorghum | nucleus | 32.91 | 15.66 |
| KXG29702 | Sorghum | nucleus | 46.2 | 14.96 |
| OQU89155 | Sorghum | nucleus | 38.61 | 14.35 |
| OQU76203 | Sorghum | nucleus | 39.87 | 13.64 |
| KXG35912 | Sorghum | nucleus | 42.41 | 13.4 |
| EES03778 | Sorghum | nucleus | 38.61 | 13.03 |
| KXG27222 | Sorghum | nucleus | 32.28 | 12.5 |
| OQU82891 | Sorghum | nucleus | 35.44 | 11.48 |
| KXG22976 | Sorghum | nucleus | 34.18 | 11.18 |
| KXG33735 | Sorghum | nucleus | 36.71 | 10.88 |
| OQU78097 | Sorghum | nucleus | 33.54 | 10.15 |
| OQU79985 | Sorghum | golgi, vacuole | 32.28 | 9.88 |
| KXG38496 | Sorghum | nucleus | 16.46 | 8.36 |
| OQU76708 | Sorghum | nucleus | 6.33 | 3.22 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A194YKA5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | EnsemblPlants:KXG20382 | ProteinID:KXG20382 | ProteinID:KXG20382.2 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF241 | EnsemblPlantsGene:SORBI_3010G192366 | InterPro:TGA_domain | UniParc:UPI0009DC8D32 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:53452812..53453964
Molecular Weight (calculated)
17173.7 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.055
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQFVVVVRH VEPLAAEQQA AGARDVEQAA RRAEEALDAE LEALLRSLSE VVSSDAQPPP PGMMYGGQLY HPADVAGYMG MGHMHVAVAM DKVASLGTIL
101: RQADELRMQA LHALRQILTA RQAARCFIAA DDYFCRLRTL STLWTTSRTA NLARGPAG
101: RQADELRMQA LHALRQILTA RQAARCFIAA DDYFCRLRTL STLWTTSRTA NLARGPAG
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNKEGN
101: RKGLASSDHD IPKSSDPKTL RRLAQNREAA RKSRLRKKAY VQQLESCRIK LTQLEQEIQR ARSQGVFFGG SLIGGDQQQG GLPIGPGNIS SAEAAVFDME
201: YARWLEEQQR LLNELRVATQ EHLSENELRM FVDTCLAHYD HLINLKAMVA KTDVFHLISG AWKTPAERCF LWMGGFRPSE IIKVIVNQIE PLTEQQIVGI
301: CGLQQSTQEA EEALSQGLEA LNQSLSDSIV SDSLPPASAP LPPHLSNFMS HMSLALNKLS ALEGFVLQAD NLRHQTIHRL NQLLTTRQEA RCLLAVAEYF
401: HRLQALSSLW LARPRQDG
101: RKGLASSDHD IPKSSDPKTL RRLAQNREAA RKSRLRKKAY VQQLESCRIK LTQLEQEIQR ARSQGVFFGG SLIGGDQQQG GLPIGPGNIS SAEAAVFDME
201: YARWLEEQQR LLNELRVATQ EHLSENELRM FVDTCLAHYD HLINLKAMVA KTDVFHLISG AWKTPAERCF LWMGGFRPSE IIKVIVNQIE PLTEQQIVGI
301: CGLQQSTQEA EEALSQGLEA LNQSLSDSIV SDSLPPASAP LPPHLSNFMS HMSLALNKLS ALEGFVLQAD NLRHQTIHRL NQLLTTRQEA RCLLAVAEYF
401: HRLQALSSLW LARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.