Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05136 | Sorghum | cytosol | 91.85 | 96.12 |
| Zm00001d016593_P001 | Maize | cytosol | 90.37 | 93.85 |
| Os04t0393500-01 | Rice | cytosol | 87.41 | 87.41 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 85.93 | 86.57 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 85.93 | 86.57 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 85.93 | 86.57 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 85.19 | 85.82 |
| GSMUA_Achr10P... | Banana | cytosol | 73.33 | 73.33 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 70.37 | 71.43 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 71.11 | 70.59 |
| KRG94592 | Soybean | plastid | 68.89 | 70.45 |
| KRH06898 | Soybean | plastid | 68.89 | 69.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.67 | 69.23 |
| Os01t0368900-01 | Rice | cytosol | 50.37 | 66.02 |
| KRH70543 | Soybean | cytosol | 64.44 | 65.41 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 57.78 | 65.0 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 57.78 | 65.0 |
| Solyc05g015910.1.1 | Tomato | cytosol | 62.96 | 64.89 |
| PGSC0003DMT400006076 | Potato | plastid | 63.7 | 64.18 |
| Os12t0538600-00 | Rice | cytosol, extracellular | 48.89 | 64.08 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 56.3 | 63.33 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 55.56 | 62.5 |
| AT3G02000.1 | Thale cress | cytosol | 61.48 | 61.03 |
| KRH01571 | Soybean | cytosol | 62.96 | 59.86 |
| Bra000980.1-P | Field mustard | cytosol | 60.74 | 59.85 |
| CDX74327 | Canola | cytosol | 60.74 | 59.85 |
| CDX91918 | Canola | cytosol | 59.26 | 59.7 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 56.3 | 58.46 |
| CDX70540 | Canola | cytosol | 59.26 | 58.39 |
| Os11t0655900-01 | Rice | extracellular | 46.67 | 58.33 |
| Os11t0656000-00 | Rice | cytosol, plastid | 46.67 | 57.8 |
| Os11t0656700-00 | Rice | cytosol, plastid | 46.67 | 57.8 |
| Os12t0538700-01 | Rice | cytosol | 44.44 | 57.69 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 66.67 | 57.69 |
| PGSC0003DMT400013430 | Potato | cytosol | 55.56 | 57.69 |
| Bra023448.1-P | Field mustard | cytosol | 58.52 | 57.66 |
| CDX85614 | Canola | cytosol | 58.52 | 57.66 |
| Bra006236.1-P | Field mustard | cytosol | 57.78 | 57.35 |
| AT5G14070.1 | Thale cress | cytosol | 59.26 | 57.14 |
| CDX78558 | Canola | cytosol | 57.78 | 56.93 |
| CDX91084 | Canola | cytosol | 57.78 | 56.93 |
| Os11t0656400-00 | Rice | cytosol, plastid | 45.93 | 56.88 |
| Os05t0149950-00 | Rice | cytosol, mitochondrion | 46.67 | 55.26 |
| Bra008782.1-P | Field mustard | cytosol | 54.81 | 55.22 |
| Os01t0936000-00 | Rice | cytosol | 46.67 | 50.4 |
| CDX69609 | Canola | cytosol | 36.3 | 48.51 |
| CDY58422 | Canola | cytosol | 45.93 | 36.9 |
| Os07t0151100-01 | Rice | cytosol | 48.15 | 33.85 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:4329462 | EMBL:AK073461 | ProteinID:BAD23238.1 | ProteinID:BAF08856.1 |
| ProteinID:BAS78870.1 | ProteinID:EAZ23199.1 | EMBL:FJ463034 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 |
| GO:GO:0045454 | GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | EnsemblPlantsGene:Os02g0512400 |
| EnsemblPlants:Os02t0512400-01 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | UniProt:Q6K609 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI00003B059A | RefSeq:XP_015624789.1 | SEG:seg |
Description
GLUTAREDOXIN 8CC-type glutaredoxin, Abiotic stress response, Floral organ development and pathogen response (Os02t0512400-01)
Coordinates
chr2:+:18414297..18415320
Molecular Weight (calculated)
14154.5 Da
IEP (calculated)
7.454
GRAVY (calculated)
0.474
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYGAAAEQA WYMPAAAPAP MVESAVARVE RLASESAVVV FSVSSCCMCH AVKRLFCGMG VHPTVHELDL DPRGRELERA LARLVGYGGP AAASPPVVPV
101: VFIGGKLVGA MDRVMAAHIN GSLVPLLKEA GALWL
101: VFIGGKLVGA MDRVMAAHIN GSLVPLLKEA GALWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.