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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • mitochondrion 1
  • cytosol 2
  • plastid 3
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0923800-01
Os02t0510000-01
Os02t0708400-01
Os02t0828566-01
Os03t0401200-01
Os03t0422702-00
Os04t0388800-01
Os04t0654700-02
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Os02t0708400-01 AT3G27960.1 21798944
AT4G15700.1 Os04t0654700-02 AT1G22920.1 21798944
AT4G15700.1 Os06t0207966-00 AT1G73360.1 21798944
AT4G15700.1 Os06t0208100-00 AT1G73360.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05230.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05230.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05230.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05230.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05250.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05250.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0828566-01 AT5G08330.1 21798944
AT4G15700.1 Os03t0422702-00 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0656400-00 Rice cytosol, plastid 94.5 94.5
Os11t0656700-00 Rice cytosol, plastid 94.5 94.5
TraesCS4D01G147300.1 Wheat cytosol 69.72 73.08
Os11t0655900-01 Rice extracellular 70.64 71.3
Zm00001d048719_P001 Maize cytosol 70.64 70.0
EES08919 Sorghum cytosol 68.81 68.81
EES08918 Sorghum cytosol, plastid 66.06 68.57
Zm00001d048720_P001 Maize cytosol 67.89 66.67
Os01t0368900-01 Rice cytosol 62.39 66.02
Os12t0538600-00 Rice cytosol, extracellular 62.39 66.02
GSMUA_Achr8P09970_001 Banana cytosol 61.47 65.05
Os12t0538700-01 Rice cytosol 59.63 62.5
GSMUA_Achr11P... Banana cytosol, extracellular 57.8 61.16
KRH71536 Soybean extracellular 55.05 59.41
VIT_05s0020g01750.t01 Wine grape cytosol 55.05 58.25
KRH31919 Soybean cytosol, plasma membrane 53.21 57.43
AT3G21460.1 Thale cress mitochondrion 53.21 56.86
VIT_07s0104g01390.t01 Wine grape plasma membrane 53.21 56.86
Bra002171.1-P Field mustard cytosol 52.29 55.88
CDX92597 Canola cytosol 52.29 55.88
CDY13904 Canola cytosol 52.29 55.88
CDY32430 Canola cytosol, plastid 52.29 55.88
VIT_05s0020g01760.t01 Wine grape cytosol 52.29 55.88
KRG96386 Soybean cytosol 51.38 55.45
KRH68125 Soybean cytosol 51.38 55.45
Os05t0149950-00 Rice cytosol, mitochondrion 57.8 55.26
Bra001830.1-P Field mustard cytosol, plastid 51.38 54.9
Bra001831.1-P Field mustard cytosol 51.38 54.9
Bra023688.1-P Field mustard cytosol 51.38 54.9
Bra023883.1-P Field mustard cytosol, plastid 51.38 54.9
CDY19270 Canola cytosol, plastid 51.38 54.9
CDY32431 Canola cytosol 51.38 54.9
CDY37292 Canola cytosol, plastid 51.38 54.9
CDY48890 Canola cytosol, plastid 51.38 54.9
CDY48891 Canola cytosol 51.38 54.9
CDY68328 Canola cytosol 51.38 54.9
Solyc06g008760.1.1 Tomato cytosol 50.46 54.46
Bra006467.1-P Field mustard cytosol 50.46 53.92
CDX70828 Canola cytosol 50.46 53.92
CDX88929 Canola cytosol 50.46 53.92
CDY02610 Canola cytosol 50.46 53.92
KRH02215 Soybean cytosol 50.46 53.92
Solyc01g067440.2.1 Tomato cytosol 50.46 53.92
Os01t0936000-00 Rice cytosol 61.47 53.6
Bra031540.1-P Field mustard cytosol 48.62 53.54
CDY06230 Canola cytosol 48.62 53.54
CDY09953 Canola cytosol 48.62 53.54
KRH11237 Soybean cytosol 49.54 52.94
PGSC0003DMT400058325 Potato cytosol 49.54 52.94
AT2G47870.1 Thale cress cytosol 49.54 52.43
KRH11238 Soybean cytosol 48.62 51.96
KRH21035 Soybean cytosol 48.62 51.96
KRH50911 Soybean cytosol 48.62 51.96
KRH50912 Soybean cytosol 48.62 51.96
Solyc01g067460.1.1 Tomato cytosol 48.62 51.96
AT1G06830.1 Thale cress cytosol 46.79 51.52
CDY10229 Canola cytosol 46.79 51.52
CDY54881 Canola cytosol 46.79 51.52
Bra033504.1-P Field mustard cytosol 44.95 51.04
AT4G15700.1 Thale cress cytosol 47.71 50.98
AT5G18600.1 Thale cress cytosol 47.71 50.98
Bra004424.1-P Field mustard cytosol 47.71 50.98
CDX80139 Canola cytosol 47.71 50.98
CDX95739 Canola cytosol 47.71 50.98
CDY53024 Canola cytosol 47.71 50.98
KRG96387 Soybean cytosol 47.71 50.98
KRH21036 Soybean cytosol 47.71 50.98
KRH68127 Soybean cytosol 47.71 50.98
PGSC0003DMT400058374 Potato cytosol 47.71 50.98
PGSC0003DMT400079099 Potato cytosol 44.95 50.52
CDY53023 Canola cytosol 47.71 50.49
Bra021641.1-P Field mustard cytosol 46.79 50.0
CDY23990 Canola cytosol 46.79 50.0
CDY29666 Canola cytosol 46.79 50.0
CDY52638 Canola cytosol 46.79 50.0
Bra004426.1-P Field mustard cytosol 46.79 49.51
CDX80138 Canola cytosol 46.79 49.51
Bra007717.1-P Field mustard cytosol 34.86 49.35
AT2G30540.1 Thale cress cytosol 45.87 49.02
AT2G47880.1 Thale cress cytosol 45.87 49.02
AT4G15690.1 Thale cress cytosol 45.87 49.02
Bra018307.1-P Field mustard cytosol 45.87 49.02
Bra033503.1-P Field mustard cytosol 45.87 49.02
CDX84825 Canola cytosol 45.87 49.02
CDX97824 Canola cytosol 45.87 49.02
CDY10745 Canola cytosol 45.87 49.02
CDY66332 Canola cytosol 45.87 49.02
CDY66333 Canola cytosol 45.87 49.02
KRH31918 Soybean cytosol 45.87 49.02
KRH71537 Soybean cytosol 45.87 49.02
Os04t0393500-01 Rice cytosol 59.63 48.15
AT3G62960.1 Thale cress cytosol 44.95 48.04
AT4G15660.1 Thale cress cytosol, extracellular 44.95 48.04
AT4G15670.1 Thale cress cytosol 44.95 48.04
AT4G15680.1 Thale cress cytosol 44.95 48.04
Bra007718.1-P Field mustard cytosol 44.95 48.04
Bra033501.1-P Field mustard cytosol 44.95 48.04
CDX76678 Canola cytosol 44.95 48.04
CDY09079 Canola cytosol 44.95 48.04
CDY11466 Canola cytosol 44.95 48.04
CDY54296 Canola cytosol 44.95 48.04
PGSC0003DMT400029525 Potato cytosol 44.95 48.04
PGSC0003DMT400029596 Potato cytosol 44.95 48.04
Solyc09g074590.1.1 Tomato cytosol 44.95 48.04
CDY27469 Canola cytosol 45.87 47.62
CDY55528 Canola cytosol 45.87 47.62
AT3G62950.1 Thale cress cytosol 44.95 47.57
Bra014380.1-P Field mustard cytosol 44.95 47.57
CDX89161 Canola cytosol 44.95 47.57
Solyc06g054570.1.1 Tomato cytosol 44.95 47.57
Bra012773.1-P Field mustard cytosol 44.04 47.06
Bra014379.1-P Field mustard cytosol 44.04 47.06
CDX89162 Canola cytosol 44.04 47.06
CDX90576 Canola cytosol 44.04 47.06
CDY09747 Canola cytosol 44.04 47.06
CDY22746 Canola cytosol 44.04 47.06
CDY54294 Canola cytosol 44.04 47.06
CDY68061 Canola cytosol 44.04 47.06
PGSC0003DMT400029597 Potato cytosol 44.04 47.06
Solyc06g008750.1.1 Tomato cytosol 44.04 47.06
Solyc09g074580.1.1 Tomato cytosol 44.04 47.06
Solyc09g074600.1.1 Tomato cytosol 44.04 47.06
VIT_07s0104g01400.t01 Wine grape cytosol 44.04 47.06
Bra033499.1-P Field mustard cytosol 42.2 46.94
Bra021444.1-P Field mustard cytosol 44.95 46.67
Os02t0512400-01 Rice cytosol 57.8 46.67
CDX76677 Canola cytosol 44.04 46.6
CDY11464 Canola cytosol 44.04 46.6
CDY11465 Canola cytosol 44.04 46.6
Bra038076.1-P Field mustard cytosol, extracellular 43.12 46.53
CDY09078 Canola cytosol, extracellular 43.12 46.53
CDY22745 Canola cytosol, extracellular 43.12 46.53
Bra003517.1-P Field mustard cytosol, extracellular 43.12 46.08
Bra038075.1-P Field mustard cytosol 43.12 46.08
PGSC0003DMT400013649 Potato cytosol 43.12 46.08
PGSC0003DMT400041380 Potato cytosol, plastid 43.12 46.08
PGSC0003DMT400041381 Potato cytosol, plastid 43.12 46.08
Solyc04g011790.1.1 Tomato cytosol, plastid 43.12 46.08
PGSC0003DMT400029673 Potato cytosol 44.04 45.28
CDY69190 Canola cytosol 43.12 45.19
Bra003515.1-P Field mustard cytosol 42.2 45.1
CDX67910 Canola cytosol 42.2 45.1
Solyc04g011870.1.1 Tomato cytosol, plastid 42.2 45.1
PGSC0003DMT400042706 Potato cytosol 42.2 44.66
Solyc09g074570.1.1 Tomato cytosol 43.12 44.34
PGSC0003DMT400041379 Potato cytosol, plastid 38.53 44.21
Solyc04g011820.1.1 Tomato cytosol 38.53 44.21
Bra014382.1-P Field mustard cytosol 41.28 44.12
CDX76675 Canola cytosol 41.28 44.12
CDX89159 Canola cytosol 41.28 44.12
CDX93949 Canola cytosol 41.28 44.12
CDY25124 Canola cytosol 41.28 44.12
PGSC0003DMT400027946 Potato cytosol, plastid 41.28 44.12
PGSC0003DMT400041382 Potato cytosol 41.28 44.12
Solyc04g011830.1.1 Tomato cytosol, plastid 41.28 44.12
Solyc04g011850.1.1 Tomato cytosol 41.28 44.12
PGSC0003DMT400027952 Potato cytosol 37.61 43.16
Bra007714.1-P Field mustard cytosol 40.37 43.14
CDY11462 Canola cytosol 40.37 43.14
PGSC0003DMT400027948 Potato cytosol, plastid 40.37 43.14
PGSC0003DMT400027949 Potato cytosol, plastid 40.37 43.14
PGSC0003DMT400027950 Potato cytosol, plastid 40.37 43.14
PGSC0003DMT400027951 Potato cytosol, plastid 40.37 43.14
PGSC0003DMT400027954 Potato cytosol, plastid 40.37 43.14
Solyc04g011810.1.1 Tomato cytosol, plastid 40.37 43.14
Solyc04g011840.1.1 Tomato cytosol 40.37 43.14
Solyc04g011860.1.1 Tomato cytosol, plastid 40.37 43.14
PGSC0003DMT400027953 Potato cytosol, plastid 39.45 42.57
VIT_07s0104g01420.t01 Wine grape cytosol 41.28 42.45
KRH68129 Soybean cytosol 39.45 42.16
PGSC0003DMT400027947 Potato cytosol, plastid 39.45 42.16
PGSC0003DMT400041378 Potato cytosol, plastid 39.45 42.16
PGSC0003DMT400042707 Potato cytosol 39.45 42.16
Solyc04g011800.1.1 Tomato cytosol, plastid 39.45 42.16
Solyc04g053110.1.1 Tomato cytosol 39.45 42.16
Solyc05g051730.1.1 Tomato cytosol 39.45 41.75
PGSC0003DMT400077394 Potato cytosol 39.45 41.35
Solyc05g051720.1.1 Tomato cytosol 39.45 41.35
AT3G62930.1 Thale cress cytosol 38.53 41.18
KRG96389 Soybean cytosol 38.53 41.18
KRH31917 Soybean cytosol 38.53 41.18
PGSC0003DMT400077393 Potato cytosol 38.53 40.78
KRH71538 Soybean cytosol 37.61 40.2
Solyc04g011780.1.1 Tomato extracellular 37.61 40.2
AT1G03020.1 Thale cress cytosol 36.7 39.22
Bra033366.1-P Field mustard cytosol 36.7 39.22
CDX89921 Canola cytosol 36.7 39.22
Solyc04g011880.1.1 Tomato cytosol, plastid 36.7 39.22
KRH31916 Soybean cytosol 33.95 38.95
CDY18141 Canola cytosol 35.78 38.24
Bra032563.1-P Field mustard cytosol 33.95 36.27
CDY32493 Canola cytosol 33.95 36.27
KRH68130 Soybean cytosol, plastid 34.86 36.19
KRG96390 Soybean cytosol, plastid 33.95 35.24
KRH31915 Soybean cytosol, plastid 32.11 33.33
Bra015532.1-P Field mustard cytosol 41.28 31.03
Os07t0151100-01 Rice cytosol 53.21 30.21
CDY71728 Canola cytosol 37.61 28.87
CDX97821 Canola mitochondrion 34.86 28.57
PGSC0003DMT400013650 Potato cytosol 39.45 14.58
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EntrezGene:9269479ProteinID:ABA95123.1ProteinID:BAH95417.1ProteinID:BAT15103.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2
InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109EnsemblPlantsGene:Os11g0656000EnsemblPlants:Os11t0656000-00PFAM:PF00462
PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF72UniProt:Q2R075SUPFAM:SSF52833
TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0000681D2ARefSeq:XP_015616679.1::
Description
GLUTAREDOXIN 24Similar to Glutaredoxin-C13. (Os11t0656000-00)
Coordinates
chr11:+:26275728..26276206
Molecular Weight (calculated)
11330.1 Da
IEP (calculated)
8.509
GRAVY (calculated)
0.423
Length
109 amino acids
Sequence
(BLAST)
001: MAEMVARLAS ERAVVVFTKS GCCMCTAVTT LLGELAVSAA VHELDRDPLG KEMEKELARR LYGSSGRGGP AVPAVFIGGS LVGGTSKVMA MHLKGELVPL
101: LKSAGALWL
Best Arabidopsis Sequence Match ( AT3G21460.1 )
(BLAST)
001: MDVVARLASQ RAVVIFSKST CCMSHAIKRL FYEQGVSPAI VEIDQDMYGK DIEWALARLG CSPTVPAVFV GGKFVGTANT VMTLHLNGSL KILLKEAGAL
101: WL
Arabidopsis Description
GRXS10Monothiol glutaredoxin-S10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIF1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.